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scnpilot_p_inoc_scaffold_884_curated_11

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 17455..20748

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1641
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMA1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1641
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 999.99
  • Bit_score: 1641
  • Evalue 0.0

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 3294
ATGCCCAGGGTTTCGCCCCGACCGCCCGCAGCCGCCCCGGCCTCGGCCCCGCCCGCCGGGGACGAGCTGAAGAACCTGACGCGGCTGATCCAGCAGGCCCGGGGCTTCCCCGAGGTGATCGCCGCCCTCCGCAACGGCCGCGCCGCCACCATCGACGGCGCGTGGGGCTCGGCCGCGGGGCTGGTCTCCGGGGCGCTGGCGCTGCACGCGCCGACGTGCCTGGTCGTCGTCCTCACCCACGTCGGCGACGTGGACGACTTCCGCGACGACGTCGCCGTCTTCTCCGGGCTCAAGCCGGAAGTCCTCCCGGCCTGGGACAAGCTCCCGCGCGAGCAGGACGCGCGCGACGAGGTCTTCGGCGCGCGGACGCGCGTCGTCGGCCGGCTGGCCGGCGGGCTGCCGCCGAAGGTCGTCGTCACGTCGATCCCGGCGCTGTTGCAGCCGGTGCCCAAGCCCGACGTCCTCCGCAGGATGTCGCGGCAGGTCCGCGTCGGCGACGTGACGCCGGTCGACGAGTTGGCCGCCTGGCTGATGGGCCGCGGCATGCAGCGGGTGGAGGTCGTGGAGGTCCCCGGGGAATTCAGCCTCCGCGGCGGCATCCTCGACGTCTTCCCCACCGACTCCACCGACCCCGTCCGCATCGAGTTCTTCGGCGACGACGTCGAGTCCATCCGCCCCTTCGACGCCGAGACCCAGCGCTCGCTGGACCGCTGGGACAACGTCACCATCGCCGTCCCCCCCGCCTTCGACCCCGACCATCACGACGACTTCGGCCCGGCCACCGACGCCTTCCCCGAGGGGACCTGGGTCGTCCTCGTCGAGCAGCACGACCTGCGCGAGGAGGGGAAGCATTACCTCTCCCGGGTCGACGACCCCCGCGGGCTCTACACCGTGGAGAGCACGTTCGAACGCCTGGTCCGACGGCCGACGATCGCGCTGTCGGCGCTCGCGGCCGACTCGCTGGAGGCGACGTGCCACCTGCGGATCGAGAGCGTGGAGCGGTTCTCGGGCGAGCTGGCGCGGGTCAAGGCCGAGCTGGAGACGGCCGCCGGCGGCGACCGCGTCGTCATCGCCTGCCACAACGCGGCCGAGGCCGAACGGCTCCGCGAGGTCTTCGCCGACTCCGACCTCGCCCGCGACGGCCGCCTGGTCACGGCCGTCGGCCGCATCCGCGCCGGGTTCCACCTGACGGAGGGCGAGACGGACACCCTGGTCATCGCCGACCACGAGCTGTTCGCCCGCGCCGACGTCCGTCGCACCACCTCGCGCCGGCGCTACGAGACACGGGCGATCGACAGCTTCCTGGACCTGAACGAGGGGGACCTCGTCGTCCACGTCAACCACGGCATCGCGAAGTACCTGGGCCTCCAGTTCGTCGACAAGGCGGGCGACCACGCCGAGGAGACGCTCCTCCTGGAGTTCGCCGAGGGGACCCGGCTGTTCGTCCCCATCGCCAAGATCGACCTGGTGCAGAAGTACGTCGGCGGCGGCAAGATCGCCCCGCCCCTGTCGAAGATCGGCTCCTCCGCGTGGGACAAGCGCAAGAAGCGCGTCGAGGAGGCCGTCGTCGACCTGGCCCAGGAACTCCTGGACATCCAGGCCGACCGCGCCAGCCAGCCCGGCTTCGCTTACCCGGCCGAGGACAGCCACTGGATGGCCGAGTTCGAGGCCGCGTTCCCGTTCGACGAGACGCCCGACCAGCTCTCGGCGATCGAGGCGATCAAGGAGGACATGGCCCAGACGAAGCCGATGGACCGCCTGATCTGCGGCGACGTCGGCTACGGCAAGACCGAGGTCGCCATCCGCGCCGCGTTCAAGGCGGTCGACGCCGGCAAGCAGGTGGGGATCCTGGTGCCGACGACGATCCTGTCGGAGCAGCACCACCGCAGCTTCGCCGCGCGCATGGGCGAGTTCCCGTTCGTCATCGAGGTCGTCAACCGCTTCCGCCCCAAGTCCGAGATCCGCGACATCCTCAAGCGGGCCGCCGAGGGGAAGGTGGACGTCCTCATCGGCACCCACCGGATCTTGCAGAAGGACGTCGCATTCAAGGACCTCGGCCTGATCGTGGTCGACGAGGAGCAGCGGTTCGGCGTCGAGGACAAGGAGTGGCTGAAGACCCTGCGCTCCACCGTCGACGTCCTGACCCTCTCCGCCACGCCGATCCCGCGCACGCTGCACATGAGCCTCCTCGGCATCCGGGACATCTCCAACCTGGAGACGCCGCCGTCCGACCGCAAGGCGATCGAGACCCGCATCCTCCGGTACGACGCCGACACCATCCGCCGCGCGATCAACCGCGAGCTGAACCGCAACGGCCAGGTGTACTTCGTCCACAACCGGATCCACGACATCCAGCAGGTCGTCGACCGGCTGAAGTCGATCGTCCCCGACGCCCGCATCGAGTTCGCCCACGGCCAGATGACGGGCGAGCAGCTCGAACGGACGATGCTCCGATTCATCAAGCGCGACTTCGACGTCCTGGTCGCCACGACGATCATCGAGAGCGGCCTGGACATCCCCAACGCCAACACCATCTTCATCAACGAGGCCGACAAGTACGGCCTCTCCGACCTCCACCAGCTCCGGGGCCGCGTGGGACGCTTCAAGCACCGCGCCTATGCCTATCTCCTGCTGGAATCCGACCGCCCGGTCACGCCCAACGCCGTGAAGCGGCTGAAGGCCATCGAGGAGTTCACGTCGCTGGGCGCCGGCTTCAAGATCGCGCTGCGCGACCTGGAGATCCGCGGCGCCGGCAACATCCTGGGCGCGGAGCAGTCGGGACACATCGAGAGCGTGGGATATGAACTCTACTGCTCGCTCCTCGAATCGGCCGTCCGCAAGGCGACCCGCCAGCCCGACAAGCCGCTGTTCGACTGCTCGGTCGAACTCAAGTGGCGCGCGTACCTCCCGCGCGACTACGTCCCGGCCCCCCGGCTCAAGCTGGAGCTGTACCGCCGCCTGGCCCGGCTGCGGACGCTCGACCACCTGGCCGACTTCCGCAAGGAGCTGAACGACCGCTTCGGCCCGCCGCCGAAGCCGGCCGAGAACCTGCTGGCCGAGGCCGAGATCCGCATCCTGGCCGGCAACTGGAAGATCGACCGGATCCACGTCGAGGCCGAGTACGCCGTCCTCACCTACCGCGACGCCAAGCGCATCGACACCCTCGCCCGCCGCCACAAGGGCCGCGTCCGCGTCGTCGACGCCAAGAAGGCGTACATCCCCCTGGGCGACGACCCGCTCACCACGCCGGGGATCGTCGGCGTCCTCAAGGAGCTTCTGGCGGCGAAACGCTGA
PROTEIN sequence
Length: 1098
MPRVSPRPPAAAPASAPPAGDELKNLTRLIQQARGFPEVIAALRNGRAATIDGAWGSAAGLVSGALALHAPTCLVVVLTHVGDVDDFRDDVAVFSGLKPEVLPAWDKLPREQDARDEVFGARTRVVGRLAGGLPPKVVVTSIPALLQPVPKPDVLRRMSRQVRVGDVTPVDELAAWLMGRGMQRVEVVEVPGEFSLRGGILDVFPTDSTDPVRIEFFGDDVESIRPFDAETQRSLDRWDNVTIAVPPAFDPDHHDDFGPATDAFPEGTWVVLVEQHDLREEGKHYLSRVDDPRGLYTVESTFERLVRRPTIALSALAADSLEATCHLRIESVERFSGELARVKAELETAAGGDRVVIACHNAAEAERLREVFADSDLARDGRLVTAVGRIRAGFHLTEGETDTLVIADHELFARADVRRTTSRRRYETRAIDSFLDLNEGDLVVHVNHGIAKYLGLQFVDKAGDHAEETLLLEFAEGTRLFVPIAKIDLVQKYVGGGKIAPPLSKIGSSAWDKRKKRVEEAVVDLAQELLDIQADRASQPGFAYPAEDSHWMAEFEAAFPFDETPDQLSAIEAIKEDMAQTKPMDRLICGDVGYGKTEVAIRAAFKAVDAGKQVGILVPTTILSEQHHRSFAARMGEFPFVIEVVNRFRPKSEIRDILKRAAEGKVDVLIGTHRILQKDVAFKDLGLIVVDEEQRFGVEDKEWLKTLRSTVDVLTLSATPIPRTLHMSLLGIRDISNLETPPSDRKAIETRILRYDADTIRRAINRELNRNGQVYFVHNRIHDIQQVVDRLKSIVPDARIEFAHGQMTGEQLERTMLRFIKRDFDVLVATTIIESGLDIPNANTIFINEADKYGLSDLHQLRGRVGRFKHRAYAYLLLESDRPVTPNAVKRLKAIEEFTSLGAGFKIALRDLEIRGAGNILGAEQSGHIESVGYELYCSLLESAVRKATRQPDKPLFDCSVELKWRAYLPRDYVPAPRLKLELYRRLARLRTLDHLADFRKELNDRFGPPPKPAENLLAEAEIRILAGNWKIDRIHVEAEYAVLTYRDAKRIDTLARRHKGRVRVVDAKKAYIPLGDDPLTTPGIVGVLKELLAAKR*