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scnpilot_p_inoc_scaffold_502_curated_32

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 42566..43114

Top 3 Functional Annotations

Value Algorithm Source
probable RNA-polymerase sigma-E factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58DA similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 172.0
  • Bit_score: 99
  • Evalue 4.80e-18
RNA-polymerase sigma-E factor {ECO:0000313|EMBL:EMI57373.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 181.0
  • Bit_score: 93
  • Evalue 2.80e-16
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 173.0
  • Bit_score: 76
  • Evalue 8.00e-12

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Taxonomy

Rhodopirellula sallentina → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTGAAACGGTGTCGGGCGTACCTGAAACGCCGGGCCCGGGGGCTGATCCCGGTCGCCATCCAGGGCAAGGTCGGGGCGAGCGACCTGGTGCAGGAGGCGCTCGTCGACGCGACGCGGCGGATCGAGGAGATGCCGGCGGGGCGGTCGGACGAGTTGCGGGCCTGGCTGTATCGGATCATGGTGCTGAACCTGGCCGAGCAGAAGCGGCGGTTCCTCGGGACGGCCCGGGCGGACGTCCGGCGCGAGGTCCGGTTGGAGGCCACCCCCCCGCGGCCGGGGCTCGCGACGCTCCGCGACCGGCTGGGCGGCGGGGGCGAGTCGCCGTCGGACCGGGCGATGGGTCGCGAGGATGAAGGCCGTCTCGCCGACGCGATCGCGGCCCTGCCGGAGGTCGAGCGCCGGGTCGTGGTGCTGCGCTACTGGGAACGCCTGGAGTACGCGGAGATCGGCCGTCGGCTGGGCGGGCGCTCGGCCGACGCGGCCCGCATGCTCCACGCCCGCGCCTGCAAGCGGCTGTTCCGGGAGATGGGGGGAGAGGCCCCTTGA
PROTEIN sequence
Length: 183
MLKRCRAYLKRRARGLIPVAIQGKVGASDLVQEALVDATRRIEEMPAGRSDELRAWLYRIMVLNLAEQKRRFLGTARADVRREVRLEATPPRPGLATLRDRLGGGGESPSDRAMGREDEGRLADAIAALPEVERRVVVLRYWERLEYAEIGRRLGGRSADAARMLHARACKRLFREMGGEAP*