ggKbase home page

scnpilot_p_inoc_scaffold_7820_curated_1

Organism: scnpilot_dereplicated_Rhodobacterales_1

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3..167)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) RepID=D5AVF2_RHOCB similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 55.0
  • Bit_score: 103
  • Evalue 7.60e-20
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 55.0
  • Bit_score: 103
  • Evalue 2.40e-20
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADE87287.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 55.0
  • Bit_score: 103
  • Evalue 1.10e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodobacter capsulatus → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGAACGAGATGGTGACGATCCCGCGCAAAGAATATGACCGCCTGCGGGCAGCTGCGGAAGATCTGTCCGACTTGCAAAGCTATGACCGCGCCAAGGCGCGGCTGGCGGCGGGAGAGGACGAGTTGATCCCGGCGGACTATGCAAACCGCCTGCTGAATGGGGAA
PROTEIN sequence
Length: 55
MNEMVTIPRKEYDRLRAAAEDLSDLQSYDRAKARLAAGEDELIPADYANRLLNGE