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scnpilot_p_inoc_scaffold_772_curated_2

Organism: scnpilot_dereplicated_Rhodobacterales_1

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 824..1711

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBD9_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 286.0
  • Bit_score: 406
  • Evalue 1.70e-110
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:AJY45540.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 288.0
  • Bit_score: 440
  • Evalue 2.60e-120
RNA polymerase sigma factor SigJ; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 286.0
  • Bit_score: 406
  • Evalue 5.50e-111

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Taxonomy

Martelella endophytica → Martelella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGGCTGGATCTGCCCGCCGAACGCCCCCATGCGGCCTGATCCCGTTGATATCTTTCAGGCGCAGCGGCCTCGGCTGCTGCGTCTGGCCTACCGGATGCTGGGCAGCCATGCCGAGGCCGAGGACATGGTGCAGGAGGCCTGGCTGCGCTGGCAGAATGGCGATCATGGTCAGGTCGCAGAACCGGCGGCCTGGCTGACGCGGGTCGTGTCGCGCCTTTGCCTCGACCAGATGAAATCGGCCCGCGCGCGGCGCGAGACCTATCCCGGCACCTGGCTGCCCGAGCCGCTGATCGAAGAACCCGACGATGCGCTGCGCCCTGACAACCTGACACTGTGGCTGATGGTGGCGCTGGAGCGCTTGTCGCCGCTGGAGCGTGCGGCCTTCCTGTTGCACGATGTTTTCGGTCAACCGCTGGATGAGGTGGCCCGTACCATTGACCGTGCCCCCGCCGCCACGCGGCAGCTGGCGGCCCGGGCACGGGCGCATGTGCAGATCGACCGCCCACGCTATACCGTGCCGCGCGACACCGGGACGGCCTTGGCCCGGGCCTTCTTTGACGCCTGCAAGACCGGCGATGCGGCAGCACTTGGCACCATGCTGGCCGAAGGCGCCACGCTGCATGCCGATGGTGGTGGCAAGGTGAATGCAGTTCTGAACGTGATCCGGGGCGAGGCCGCGATCACCCGCATGTTCGCGGCCCTGTCGCGCAAATTCGGTGCGGAAATGGAACTGCTGAGCACAACCACGATCGACGGATTGCCGGGCTTCATCTCCCGCATTGCCGGCTCTCTGCAAACCACGGCGCTGGACATCACGGACGGCCGTATCAACCGGATCTACATCACCCGTAACCCGGACAAGTTGACCGGGGTGCTGCCGCATTGA
PROTEIN sequence
Length: 296
MGWICPPNAPMRPDPVDIFQAQRPRLLRLAYRMLGSHAEAEDMVQEAWLRWQNGDHGQVAEPAAWLTRVVSRLCLDQMKSARARRETYPGTWLPEPLIEEPDDALRPDNLTLWLMVALERLSPLERAAFLLHDVFGQPLDEVARTIDRAPAATRQLAARARAHVQIDRPRYTVPRDTGTALARAFFDACKTGDAAALGTMLAEGATLHADGGGKVNAVLNVIRGEAAITRMFAALSRKFGAEMELLSTTTIDGLPGFISRIAGSLQTTALDITDGRINRIYITRNPDKLTGVLPH*