ggKbase home page

scnpilot_p_inoc_scaffold_1278_curated_5

Organism: scnpilot_dereplicated_Sphingobacteriales_3

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 3856..4329

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA large subunit methyltransferase H; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 237
  • Evalue 3.10e-60
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 237
  • Evalue 1.40e-59
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 237
  • Evalue 9.70e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 474
ATGAAGATCCAGTTATGGTCGGTAGGCAAGGCGCATGAGCCGTATGTGAAAGCCGGAGTGGAAGATTTTACGCGGCGGGCCGGTAATTATTTTAAGGTGGAATGGCTGCTGCTGCCGGCTCCTAAAAATGCCGGACAGCTGAGCGAGGCCGATCTGCGCAAACGCGAAGGTGAAATAATCCTGGAAACGCTCGAGAAAGATGATTACCTCATAGCTCTCGATGAGCGGGGTAAAATGCTGAGCTCAGAAGGACTGGCGCAACTGCTGCAGACAAGGGCCAATGAAAGTACCCGGCGATTAATATTTCTCATCGGCGGAGCCTATGGATTGGATGCGGCCGTCATGAAACGGGCTAACCTCAGCTGGAGCCTTTCACAACTGGTGTTTCCGCATCAGCTGGTACGACTCATACTGGCTGAGCAGGTATACCGCGCCTGCACGATTCTTAAAAACGAAAAATACCATCATAAATAA
PROTEIN sequence
Length: 158
MKIQLWSVGKAHEPYVKAGVEDFTRRAGNYFKVEWLLLPAPKNAGQLSEADLRKREGEIILETLEKDDYLIALDERGKMLSSEGLAQLLQTRANESTRRLIFLIGGAYGLDAAVMKRANLSWSLSQLVFPHQLVRLILAEQVYRACTILKNEKYHHK*