ggKbase home page

scnpilot_p_inoc_scaffold_11484_curated_2

Organism: scnpilot_dereplicated_Sphingobacteriales_3

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(715..1917)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAA8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 141.0
  • Bit_score: 186
  • Evalue 6.50e-44
RHS repeat-associated core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 141.0
  • Bit_score: 186
  • Evalue 2.10e-44
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEV97055.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 141.0
  • Bit_score: 186
  • Evalue 9.20e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1203
ATGCGTCTTGGTAAATTGATTACCTTCACCAGAGGCGAAAAGATCTTTGAATTAAGCAATCACCTGGGCAATGTACTGGCCACCATTAATGATAAGAAACTGGCGACCGATGATGGTAATGGAGAAGTGGCATACTACGAGGCAGATGTGGTGACGGCCAGTGATTATTATCCGGGCGGTATGGTAATGGTTGGGAGAAAGTTTGAAGCAGGTGCATACCGTTATGGGTTTAATGGAAAGGAGAATGATAATGAGGTGAAGGGAGAGGGAAATCAGCAGGATTATGGGATGAGGATTTATGACCCGAGGTTGGTAAGGTTCTTGTCTGTCGATCCGTTAAGTAAATGGTATCCGTTTTATACACCCTATCAATTTGCCAGTAATTCACCAATTATTGCAGTTGATGTTGATGGCTTGGAATCAAGTAAGATTCTAAATAAGGCTGAGCAAATGTTGAATACTCCGTATGAGTTTGGTGGTAAAAAACCAGCACCTGAATTAATCGGGCTGCTACGTTCAGAAGAAGGTAAGACGTTTTGGAGCACTTTGCTTTTACCAGGTCTTAGAAAGATTTCGAATTATCATCCTGGTCATTATAAGAAAGGGCCAGGAGAGGTTTGTACCGCTACTGATTTGTATCAGCAATGGGCAGAGGTTGTAAAGAGTGTTTATCAAGATTTTTCTACCTATTCGAATAAAGGTTCTCTTGGTATAGATTGCTCTGGTTTTGTAAATGCTTCATATCAGGAGGATAAAAAGTTACTATTTGATTCTAAAATTTTGAGAACTGGATCAAGCGGTCAGTTAGCTGCATTTAGAAAAGCGGAAAAAGAGGGTAAGGCTTATGTTCATAAGGATTTTAATTTGCTATCGGAAGGCGATTTTATTTACAAGCCTGACCATGTTATGATTGCGACTGGGAATGTTATGGTTGATGAGTCGGGAAAGGTTATTAGCTTTGAGACATATGAGGCAAATTCAGCCGATGTCGGCACTGTTAAAATGTGGAGGAAAGTAGGAAAATCTTATACAATAGGTCATCCATTCAGAACTTCTGATGACGGAGGAAGTATTAAGTTAGAAATCCCGTTCATTGGTACTGTTACAATACCTCTACCAACATTGCCCTCCGAGAATGCTAAACAACGAACTATTGATAATCAGGAACGAAAAACCATAGAAGTAAAAAAAATCAAAAAGTAA
PROTEIN sequence
Length: 401
MRLGKLITFTRGEKIFELSNHLGNVLATINDKKLATDDGNGEVAYYEADVVTASDYYPGGMVMVGRKFEAGAYRYGFNGKENDNEVKGEGNQQDYGMRIYDPRLVRFLSVDPLSKWYPFYTPYQFASNSPIIAVDVDGLESSKILNKAEQMLNTPYEFGGKKPAPELIGLLRSEEGKTFWSTLLLPGLRKISNYHPGHYKKGPGEVCTATDLYQQWAEVVKSVYQDFSTYSNKGSLGIDCSGFVNASYQEDKKLLFDSKILRTGSSGQLAAFRKAEKEGKAYVHKDFNLLSEGDFIYKPDHVMIATGNVMVDESGKVISFETYEANSADVGTVKMWRKVGKSYTIGHPFRTSDDGGSIKLEIPFIGTVTIPLPTLPSENAKQRTIDNQERKTIEVKKIKK*