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scnpilot_p_inoc_scaffold_1982_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1982_curated_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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189..2123
DNA (1935bp) protein (645aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZI2_9SPHN
peptidyl-prolyl isomerase
scnpilot_p_inoc_scaffold_1982_curated_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2120..3646
DNA (1527bp) protein (509aa)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
Anthranilate synthase component I n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRE1_9SPHN
Anthranilate synthase component I {ECO:0000313|EMBL:GAD47929.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1982_curated_3
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3646..4446
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQ15_9SPHN
Putative periplasmic protein {ECO:0000313|EMBL:EZP84876.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1982_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4443..5027
DNA (585bp) protein (195aa)
anthranilate synthase, component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
Anthranilate synthase component II n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4E6_9SPHN
Anthranilate synthase component II {ECO:0000313|EMBL:GAD47931.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1982_curated_5
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5024..6019
DNA (996bp) protein (332aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIK6_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6038..6823
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZI7_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6994..7470
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI42_9SPHN
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C
scnpilot_p_inoc_scaffold_1982_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7475..8671
DNA (1197bp) protein (399aa)
Molybdopterin molybdenumtransferase {ECO:0000313|EMBL:AKH41662.1}; EC=2.10.1.1 {ECO:0000313|EMBL:AKH41662.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdopterin biosynthesis protein MoeA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4F0_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8742..9437
DNA (696bp) protein (232aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
repressor LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIK9_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9469..11640)
DNA (2172bp) protein (724aa)
Predicted membrane metal-binding protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NA92_ERYLH
ComEC family competence protein {ECO:0000313|EMBL:AKH41664.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
membrane metal-binding protein; K02238 competence protein ComEC
scnpilot_p_inoc_scaffold_1982_curated_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11726..13168
DNA (1443bp) protein (481aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRF0_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13181..14467
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI45_9SPHN
scnpilot_p_inoc_scaffold_1982_curated_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14522..15229)
DNA (708bp) protein (236aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4F4_9SPHN
two-component signal transduction histidine kinase
Displaying 13 items

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