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scnpilot_p_inoc_scaffold_2330_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2330_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..850)
DNA (849bp) protein (283aa)
Cytosol aminopeptidase {ECO:0000313|EMBL:AKH42169.1}; EC=3.4.11.1 {ECO:0000313|EMBL:AKH42169.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXX8_9SPHN
scnpilot_p_inoc_scaffold_2330_curated_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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985..3315
DNA (2331bp) protein (777aa)
Organic solvent tolerance protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8X2_ERYLH
organic solvent tolerance protein; K04744 LPS-assembly protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_2330_curated_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3489..4856
DNA (1368bp) protein (456aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase SurA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7S6_9SPHN
scnpilot_p_inoc_scaffold_2330_curated_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4864..5865
DNA (1002bp) protein (334aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y356_9SPHN
scnpilot_p_inoc_scaffold_2330_curated_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5870..6691
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HGA4_9SPHN
scnpilot_p_inoc_scaffold_2330_curated_6
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6666..7175)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VXQ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK91819.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
scnpilot_p_inoc_scaffold_2330_curated_7
unknown

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7335..8231
DNA (897bp) protein (299aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2330_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8256..8648)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYB1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83194.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_p_inoc_scaffold_2330_curated_9
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8815..9768
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00037D646D
Uncharacterized protein {ECO:0000313|EMBL:KHL25279.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
acetyltransferase
scnpilot_p_inoc_scaffold_2330_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9782..11884)
DNA (2103bp) protein (701aa)
Malate synthase G {ECO:0000313|EMBL:AKH42175.1}; EC=2.3.3.9 {ECO:0000313|EMBL:AKH42175.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase G n=1 Tax=Novosphingobium sp. AP12 RepID=J2G525_9SPHN
scnpilot_p_inoc_scaffold_2330_curated_11
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12013..13227
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PC23_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48593.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
Displaying 11 items

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