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scnpilot_p_inoc_scaffold_735_curated

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Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_735_curated_31
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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31673..31915
DNA (243bp) protein (81aa)
Putative acyl carrier protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUQ2_9SPHN
Putative acyl carrier protein {ECO:0000313|EMBL:GAD49109.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_32
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31942..33144
DNA (1203bp) protein (401aa)
Serine palmitoyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5Y4_ERYLH
serine palmitoyltransferase
Serine palmitoyltransferase {ECO:0000313|EMBL:ABC64907.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_735_curated_33
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33209..34783)
DNA (1575bp) protein (525aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPM8_9SPHN
scnpilot_p_inoc_scaffold_735_curated_34
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35327..35665
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D670DD
Uncharacterized protein {ECO:0000313|EMBL:AKH43079.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_735_curated_35
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36218..36505
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH43080.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_735_curated_36
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36618..39176
DNA (2559bp) protein (853aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3B8BD
scnpilot_p_inoc_scaffold_735_curated_37

Not on your lists

comp(39193..39519)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SI41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKO09142.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_38
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39569..39934
DNA (366bp) protein (122aa)
MarR family transcriptional regulator n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P224_9CAUL
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_p_inoc_scaffold_735_curated_39
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40011..41795
DNA (1785bp) protein (595aa)
5'-nucleotidase {ECO:0000313|EMBL:GAO54079.1}; EC=3.1.3.5 {ECO:0000313|EMBL:GAO54079.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
5'-nucleotidase (EC:3.1.3.5); K01081 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAW7_NOVAD
scnpilot_p_inoc_scaffold_735_curated_40
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41799..42641)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3I2_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KEZ00470.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_41
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42742..43779)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7P1_9SPHN
Carbohydrate acetyl esterase/feruloyl esterase {ECO:0000313|EMBL:AKH43085.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative esterase
scnpilot_p_inoc_scaffold_735_curated_42
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43804..44820)
DNA (1017bp) protein (339aa)
Putative esterase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILH0_9SPHN
Esterase {ECO:0000313|EMBL:AJP73849.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative esterase
scnpilot_p_inoc_scaffold_735_curated_43
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44825..45862)
DNA (1038bp) protein (346aa)
Putative esterase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILH0_9SPHN
Esterase {ECO:0000313|EMBL:AJP73849.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative esterase
scnpilot_p_inoc_scaffold_735_curated_44
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46075..47661)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJR6_9SPHN
AAA-like domain protein {ECO:0000313|EMBL:AKH43114.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K06915
scnpilot_p_inoc_scaffold_735_curated_45
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47691..49571
DNA (1881bp) protein (627aa)
Aminodeoxychorismate synthase component 1 {ECO:0000313|EMBL:AKH43115.1}; EC=2.6.1.85 {ECO:0000313|EMBL:AKH43115.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Para-aminobenzoate synthase, component I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
Para-aminobenzoate synthase component I n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6B8_9SPHN
scnpilot_p_inoc_scaffold_735_curated_46
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49571..50746
DNA (1176bp) protein (392aa)
aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate transaminase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK99_9SPHN
Aspartate transaminase {ECO:0000313|EMBL:GAD48707.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_735_curated_47
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50743..51423
DNA (681bp) protein (227aa)
pseudouridylate synthase (EC:4.2.1.70); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5E5_9SPHN
Pseudouridine synthase {ECO:0000313|EMBL:EJU14906.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
scnpilot_p_inoc_scaffold_735_curated_48
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51416..51826
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTJ7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48709.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
class I peptide chain release factor domain-containing protein; K15034 ribosome-associated protein
scnpilot_p_inoc_scaffold_735_curated_49
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


51953..52120
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=2 Tax=Novosphingobium RepID=F6IK26_9SPHN
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_p_inoc_scaffold_735_curated_50
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52184..52849
DNA (666bp) protein (222aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6C2_9SPHN
Outer-membrane lipoprotein carrier protein {ECO:0000313|EMBL:AKH43120.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
outer membrane lipoprotein-sorting protein
scnpilot_p_inoc_scaffold_735_curated_51
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53149..53943
DNA (795bp) protein (265aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:AKH43121.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AKH43121.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
exonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exonuclease III n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8T2_9SPHN
scnpilot_p_inoc_scaffold_735_curated_52
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53979..55004
DNA (1026bp) protein (342aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
GTP cyclohydrolase II (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
GTP cyclohydrolase II n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A1T5_9SPHN
scnpilot_p_inoc_scaffold_735_curated_53
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55116..56069)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0E1F
Uncharacterized protein {ECO:0000313|EMBL:AKH43124.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_54
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56116..56442)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SAV2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92551.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_55
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56447..56662)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VHE2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU09985.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_56
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56670..57569)
DNA (900bp) protein (300aa)
Putative integral membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N748_ERYLH
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ABC64493.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
scnpilot_p_inoc_scaffold_735_curated_57
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57747..58049
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKB3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43128.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_58
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58134..58400
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N745_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH43129.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_735_curated_59
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58404..59261
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030AB83C
hypothetical protein; K09709 mesaconyl-C4 CoA hydratase
Uncharacterized protein {ECO:0000313|EMBL:CCA93953.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_735_curated_60
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59369..60145)
DNA (777bp) protein (259aa)
Transcriptional regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N740_ERYLH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABC64501.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
Displaying items 31-60 of 65 in total

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