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scnpilot_p_inoc_scaffold_5939_curated_6

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(6068..6691)

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXS8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 207.0
  • Bit_score: 368
  • Evalue 3.70e-99
Putative two-component response regulator {ECO:0000313|EMBL:GAD47308.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 207.0
  • Bit_score: 368
  • Evalue 5.20e-99
two component sigma-54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 206.0
  • Bit_score: 350
  • Evalue 4.30e-94

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
CTCGACGAAGTGGGCGATATTCCCCTGCCGCTGCAGGTAAAGCTGCTGCGCTTCCTGCAGGAACGCACGATTGAGCGGATCGGCGGGCGCAAATCCATCGCCGTCGATACGCGCATTGTCTGCGCCACCCATCAGGATCTGGAAGCGATGATCGCCGATGGCCGCTTCCGCGAGGATCTGTTCTATCGTCTGGCCGAGATCGTGGTGAAAATCCCCTCGCTGGCGGAACGTCCCGGTGATGCGACTTTGCTGGCCAAGGCTTTCCTCAAGCGTTTCGCGCGGGAAATGAACCCCGGGGTCAAGGGCTTTGCTGCCGATGCGCTGGCCGTGATCGATGCGTGGAAATGGCCCGGCAATGTGCGCGAGCTGGAAAACCGGGTGAAGCGCGCGGTCATCATGGCGGATGGCAAGCTTATCAACGCCGCCGATCTCGACCTTGAAGGGGCGGAGGATGACGACAGCCAACCGCTCAACCTCAAGAGCGCGCGTGAACAGGCGGACCGGCGGGTAATCCGCCACGCATTGGCACGCAGCGAAGGCAATATTTCCAACACGGCCAAGCTGCTGGGGATCAGCCGGCCCACGCTTTACGATCTCCTCAAGCAGTATGACCTCCACGCCTGA
PROTEIN sequence
Length: 208
LDEVGDIPLPLQVKLLRFLQERTIERIGGRKSIAVDTRIVCATHQDLEAMIADGRFREDLFYRLAEIVVKIPSLAERPGDATLLAKAFLKRFAREMNPGVKGFAADALAVIDAWKWPGNVRELENRVKRAVIMADGKLINAADLDLEGAEDDDSQPLNLKSAREQADRRVIRHALARSEGNISNTAKLLGISRPTLYDLLKQYDLHA*