ggKbase home page

scnpilot_p_inoc_scaffold_5237_curated_1

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 557..1105

Top 3 Functional Annotations

Value Algorithm Source
Putative GAF sensor protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC44_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 160.0
  • Bit_score: 245
  • Evalue 3.20e-62
GAF sensor protein; K07170 GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 160.0
  • Bit_score: 245
  • Evalue 1.00e-62
Putative GAF sensor protein {ECO:0000313|EMBL:ABD24579.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 160.0
  • Bit_score: 245
  • Evalue 4.50e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCAGAGCGGAATAAACTCTCGCGCGGCTTGCGGCAACGGGGCAGCACATTACATCTGCGGGGCAATGTATGATTTCGCGCCCGATTCCGCCCTTTCCAAAGCCGAATTGCACGGTGAGCTGCTGTCCGCCGCGGATGCGATTACCGCCGGAGAAAGCGACGGCGTAGCCAATATGGCCAATGTCGCCGCGCTGATCTGGCAATATCTGCCCGATCTCAACTGGGCGGGCTTCTATCGGGTAATAGGGCAGGAATTGGTTCTCGGCCCCTTTTGCGGAAAACCGGCCTGTATCCGTATTGGCTGGGGCAAGGGTGTGTGCGGCACGGCGGCAGCCGCAGCGGCCACCCAGCTGGTGGAAGATGTCCATGCCTTCCCCGGCCATATAGCCTGCGATGCGGCGAGCCGTTCGGAACTGGTCGTGCCCGTGTTGCGCGATGGAAACGTCATTGTGATAATCGATCTCGACAGCCCCAGCCCTGCCCGTTTCGATAGCGAGGATGCCAGGGCTCTGGAAGAGCTGGCCGCCCTGCTCTCTTCGCGAATCTGA
PROTEIN sequence
Length: 183
MQSGINSRAACGNGAAHYICGAMYDFAPDSALSKAELHGELLSAADAITAGESDGVANMANVAALIWQYLPDLNWAGFYRVIGQELVLGPFCGKPACIRIGWGKGVCGTAAAAAATQLVEDVHAFPGHIACDAASRSELVVPVLRDGNVIVIIDLDSPSPARFDSEDARALEELAALLSSRI*