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scnpilot_p_inoc_scaffold_11529_curated_3

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3281..3562)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 93.0
  • Bit_score: 192
  • Evalue 1.60e-46
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EJU15028.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 93.0
  • Bit_score: 192
  • Evalue 2.30e-46
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 93.0
  • Bit_score: 171
  • Evalue 1.20e-40

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCTGACGGCGCGGATCATGGCGGCGAGCTGCCGGGCTTCTCCGTTCCCGTGCACCGGGCGCTGACCGAGCACATCCTGCTCGGCGGCGCGCCGCGTTCGCTCGCCATCCTCAACGGCACGCTGGCGGCCGCGCTCGGCCTCGGCCTTCGCCTATGGCTAGTCGGCCTCGGGCTTTGGGCTGTGGGGCATTTCGCGGCGGTCTGGGCGGCCAAACGCGATCCGCAGTTCGTCGACGTCGTGCGCAAGCATCTGCGCGTCCCCGGCCACCTGTCGGTCTGA
PROTEIN sequence
Length: 94
MADGADHGGELPGFSVPVHRALTEHILLGGAPRSLAILNGTLAAALGLGLRLWLVGLGLWAVGHFAAVWAAKRDPQFVDVVRKHLRVPGHLSV*