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scnpilot_p_inoc_scaffold_1326_curated_16

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 23014..23259

Top 3 Functional Annotations

Value Algorithm Source
MerR family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0002F991C4 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 50.0
  • Bit_score: 74
  • Evalue 4.30e-11
ScaffoldA29, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29412.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 50.0
  • Bit_score: 72
  • Evalue 3.90e-10

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGTCACTGTCGTTCATCCGCCGTTCCCGCGATCTCGGTTTCACGCTCGATCAGGTGCGAAAGGTCCTGAAGCTAGCCGACGACCGCGATGCGCCTTGCGTGGAAGTCGACAACATCACTGCCGCTCAAGATGTGAAGCAGGATCGTGGGATGGTGCACCCGACAGGATTCGAACCTGTGGCCCCCAGATTAGGAATCTGGTGCTCTATCCTGCTGAGCTACGGGTGCACGCATCCGAGCCTTTAA
PROTEIN sequence
Length: 82
MSLSFIRRSRDLGFTLDQVRKVLKLADDRDAPCVEVDNITAAQDVKQDRGMVHPTGFEPVAPRLGIWCSILLSYGCTHPSL*