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scnpilot_p_inoc_scaffold_3200_curated_11

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(10025..10225)

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIF9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 66.0
  • Bit_score: 94
  • Evalue 5.60e-17
TonB-dependent receptor {ECO:0000313|EMBL:GAO54816.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 66.0
  • Bit_score: 97
  • Evalue 9.40e-18
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 87
  • Evalue 1.70e-15

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
TACACGCGCACGGTGGACGATCTTTCGGCCTCGGTCACTTATGCGATGGATTCCGGGCTGGAGTTCTCGCTGTGGGGCCGCAACCTGCTCGACGATCGCTATATCCTGTCGATCTTCGATTCAGTGGCGCAGCCGCTCTCGATTTCCGGCTATCCCAACCAGCCGCTCACCTGGGGTGGAACGGTGCGCTTCAAGTGGTAA
PROTEIN sequence
Length: 67
YTRTVDDLSASVTYAMDSGLEFSLWGRNLLDDRYILSIFDSVAQPLSISGYPNQPLTWGGTVRFKW*