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scnpilot_p_inoc_scaffold_2509_curated_2

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(491..1975)

Top 3 Functional Annotations

Value Algorithm Source
thymidine phosphorylase (EC:2.4.2.4) similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 493.0
  • Bit_score: 736
  • Evalue 5.00e-210
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703, ECO:0000313|EMBL:CCA90511.1};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 493.0
  • Bit_score: 736
  • Evalue 2.20e-209
Putative thymidine phosphorylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDY6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 493.0
  • Bit_score: 736
  • Evalue 1.60e-209

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGCCGAAAATCCGGCGCATACCGATAGATACTCATCCGGAAAACACCGCATTCCTGCTGCGTCACGGCAATCATTATTCGCCCGAGCAGTTTCAGGCGCTGCGCAAGCTGCGGGTGAAGGCGGATTGCGGGGAAATCCTTGCAACGCTGGCTTTGGTGGATGATCCAGCCATCGTCGCGCCGGGTGAAATCGGGCTGGGCGAACAGGCCTTCCGCCGCCTTGGCCTGCCCGAAGGCACAGAGGTCAGCTTCGAACAGGCGCTGGCCCCGGCCAGCCTGGAATATGTGCGCCGCAAGATCGGCGGTTACACTCTGGGCGAGGGGGAGATCACTTCGGTGATCCGCGATGTCGCCTCCCACCAATATTCCCCGATGGAAATCGGTGCCTTTCTGGTGGCCTGCGCCGGTTTCATGAGCACGGATGAGACGCTGGCGCTCACTCGCGCGATGATCGAAGCCGGCAATCGCCTCCATTGGGATGCGCCGCTGGTGGTGGACAAGCATTGCATCGGCGGCATCCCGGGCAATCGCACCTCCATGATCGTGGTGCCGATTGTGGCGGCCCACGGCCTGATCTGCCCCAAGACATCCTCGCGCGCGATTACCTCGCCCTCCGGCACGGCAGACACGATGGAAGTGCTGGCGCAGGTCGACCTGACCGAGGCGCGGATGCAGGAGATTGTCGCGCGCGAAAATGCCGTCCTGGCATGGGGTGGGCGGGTGAACTTGTCTCCTGCGGACGATGTGCTGATCTCAGTCGAACGGCCATTGCGGCTCGATACGTTCGAGCAGATGGTCGCTTCCATTCTGTCCAAGAAGATCGCCGCCGGGTCCACTCATCTGGTGATCGACATCCCCATCGGCCCCACTGCCAAGGTGCGGACACAGAGCGATGCGGTGCGGCTGCGCAAGCTGTTCGAATATGTGGCGGGCAGCATCGGCCTTGTTACCGACATTGTCTTCACGGACGGTTCGCAGCCTATCGGTCGCGGGATCGGGCCGGTGCTGGAAGCGCGGGACGTGATGGCGGTGCTGCGCTGCGAAGCCGATGCGCCGCAGGATCTGCGCGAACGGGGCCTGCTGCTGGCGGGGCACATGCTGGAATTCGACCCCTCGCTGAAGGGCGGGGAAGGGCTCGGCAGAGCGCGGGAATTGCTGGATAATGGGGAAGCGCTGGCCGCCATGGAACGATTGATCGCGGCGCAAGGCCCCTGCCAGGAGCAGTACCTGCCGGGCGCCCAGTGCCACGAAATCCTCTCTCCACGGGACGGGACTGTTCTGGGCATCGATTGCGAGCGTATTGCCCGGATCGCTCGTCTTGCCGGCGCGCCGATGGACAAGGGCGCGGGCATCGACCTGCTGCACAAGGTGGGGAGCAAGGTGGCGGTGGACGAGCCGCTTTATCGCATTCACGCCAATTCGGACACGGGACTGGCCTTCGCGCGCGATCTTGCCGGCGAGAATTCAGGATACGGCATCGCGTGA
PROTEIN sequence
Length: 495
MPKIRRIPIDTHPENTAFLLRHGNHYSPEQFQALRKLRVKADCGEILATLALVDDPAIVAPGEIGLGEQAFRRLGLPEGTEVSFEQALAPASLEYVRRKIGGYTLGEGEITSVIRDVASHQYSPMEIGAFLVACAGFMSTDETLALTRAMIEAGNRLHWDAPLVVDKHCIGGIPGNRTSMIVVPIVAAHGLICPKTSSRAITSPSGTADTMEVLAQVDLTEARMQEIVARENAVLAWGGRVNLSPADDVLISVERPLRLDTFEQMVASILSKKIAAGSTHLVIDIPIGPTAKVRTQSDAVRLRKLFEYVAGSIGLVTDIVFTDGSQPIGRGIGPVLEARDVMAVLRCEADAPQDLRERGLLLAGHMLEFDPSLKGGEGLGRARELLDNGEALAAMERLIAAQGPCQEQYLPGAQCHEILSPRDGTVLGIDCERIARIARLAGAPMDKGAGIDLLHKVGSKVAVDEPLYRIHANSDTGLAFARDLAGENSGYGIA*