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scnpilot_p_inoc_scaffold_2621_curated_6

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 5094..5438

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 114.0
  • Bit_score: 203
  • Evalue 1.20e-49
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 114.0
  • Bit_score: 200
  • Evalue 3.00e-49
DNA-directed RNA polymerase subunit omega n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKP8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 114.0
  • Bit_score: 203
  • Evalue 1.50e-49

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGCGCGCGTTACCGTCGAAGATTGCGTCGACAAGGTTCCCAACCGTTTCGATCTCGTCCTGCTTGCAGCGCAGCGTGCGCGCGAGATTTCCGGCGGCGCAGAACTGACCGTCGATCGCGACCGGGACAAGAACCCCGTGGTCGCCCTGCGCGAAATCGCTGACGAAACCGTTCGCCCGCGCGAACTCAAGGAATCGCTCACCCAGTCGCTGCAGCGCGTGCTGCCTGACGATGAGGATGAAGCGGATGAAATCGGTTCGCTGAGCCAGTCGGCCGAGGCGCTGCGCATCACTGCCGCCGCCCCGACCCGCTCGACCTCGATCGGCGCCGATTACGACGGCTGA
PROTEIN sequence
Length: 115
MARVTVEDCVDKVPNRFDLVLLAAQRAREISGGAELTVDRDRDKNPVVALREIADETVRPRELKESLTQSLQRVLPDDEDEADEIGSLSQSAEALRITAAAPTRSTSIGADYDG*