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scnpilot_p_inoc_scaffold_1655_curated_32

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 24353..24622

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J1Q5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 178
  • Evalue 3.10e-42
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 178
  • Evalue 4.30e-42
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 175
  • Evalue 8.10e-42

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCACATAAAAAAGCAGGCGGTTCGTCCCGTAACGGTCGCGACTCGGCGGGCCGTCGCCTTGGCGTGAAGAAGTTCGGCGGTCAGGAAGTGATCGGCGGCAACATCATCATTCGCCAGCGCGGAACCAAGGTCTATCCGGGCGTGAATGTCGGCATGGGCAAGGATCACACCTTGTTTGCGCTCGCCGAAGGTCGCGTGCGATTCCACGATGGCAAGCTCGGCCGTAAATACGTCTCTGTAGACGTAATGGCTGAAGCCGCCGAATAA
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSAGRRLGVKKFGGQEVIGGNIIIRQRGTKVYPGVNVGMGKDHTLFALAEGRVRFHDGKLGRKYVSVDVMAEAAE*