ggKbase home page

scnpilot_p_inoc_scaffold_9586_curated_4

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3460..4809

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 3 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL19_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 449.0
  • Bit_score: 795
  • Evalue 2.60e-227
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 449.0
  • Bit_score: 795
  • Evalue 3.70e-227
peptide chain release factor 3; K02837 peptide chain release factor 3 similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 444.0
  • Bit_score: 776
  • Evalue 4.00e-222

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGGCCAATCCGTCTGTTTCCAATCGCCGCACCTTTGCGATCATTTCCCACCCCGACGCGGGTAAGACGACGCTTACGGAAAAGCTCCTGCTGCAAGGCGGGGCGATCCACCTTGCGGGCGAAGTGAAGGCGCGCGGCGCGGCGCGGCGTGCCCGGTCGGACTGGATGAAGATCGAACAGCAGCGCGGCATCTCGGTCACCAGCTCGGTGATGACCTTCGAGAAGGCCAATCCCGACGGAAGCATCATCACTTTCAACCTGCTGGACACGCCGGGGCACGAGGATTTCTCCGAAGATACCTATCGCACGCTGACGGCGGTGGATTCGGCCATCATGGTGATCGACGCGGCCAAGGGTATCGAGCCGCAGACGCGCAAGCTGTTCGAGGTCTGCCGGTTGCGTAGCGTGCCCATCATCACCTTCATCAACAAGGTGGACCGCGAAGGGCGCCCCTGCTTCGAACTGCTGGACGAAGTGGCCGACATGCTGGCGCTGGACGTTTCCCCGCAGGCCTGGCCCATCGGCATGGGCGGACTGTTCGAGGGGATTCTCGATTTCGCCACCAACAGGGCCAGCCGTCCCGAAGGGGACAGCCGGGAGTTCCTGGGCAAGCGCGATGTGGACCCTTCCCTGCCCGAGGATGTGGCCGAGGAAATGGAACTGGCGCGCGGGATCTATCCCGAATTCGATCTTGACGCTTATCGCAATGGCGACCTGACCCCGGTCTATTTCGGATCGGCGCTGAAGAATTTCGGCGTGGCCGAACTGATCGACGCCATTGCCCGCTATGCCCCGCCACCGCGCCCGCAACCGGCGGAGGGCGGGACTATTGCGCCTGACAAGGATGAAGTCACCGGCTTCATCTTCAAGGTGCAGGCCAATATGGACCCGCAGCACCGCGACCGGATCGCCTTCATGCGCATGGTCAGCGGTACCTTCAAGCGCGGCATGAAGCTCACGCCTTCGGGCCTTGGCAAGCCGATTGCCGTCCATTCGCCCATCCTGTTCTTCGCGCAGGATCGCGAGATTGCCGACACGGCCGAGGCCGGGGACATCATCGGCATTCCTAACCACGGCACTCTGCGCGTGGGCGATACGCTGTCGGAAAAGAACGATGTGCGCTTCACCGGTCTGCCTAATTTCGCGCCGGAAATCCTGCGCCGCATCGCCCTGAAAGACCCGACCAAGACCAAGCAGCTGCGCAAGGCGCTGGACGATCTTTCCGAAGAAGGCGTGATCCAGGTGTTCTATCCCGAGATCGGCAGCCAGTGGATCGTGGGCGTGGTCGGCCAGCTTCAGCTGGATGTGCTCGTCAGTCGGCTGGAGGCGGAATATAAGGTAGAGGCGCGG
PROTEIN sequence
Length: 450
MANPSVSNRRTFAIISHPDAGKTTLTEKLLLQGGAIHLAGEVKARGAARRARSDWMKIEQQRGISVTSSVMTFEKANPDGSIITFNLLDTPGHEDFSEDTYRTLTAVDSAIMVIDAAKGIEPQTRKLFEVCRLRSVPIITFINKVDREGRPCFELLDEVADMLALDVSPQAWPIGMGGLFEGILDFATNRASRPEGDSREFLGKRDVDPSLPEDVAEEMELARGIYPEFDLDAYRNGDLTPVYFGSALKNFGVAELIDAIARYAPPPRPQPAEGGTIAPDKDEVTGFIFKVQANMDPQHRDRIAFMRMVSGTFKRGMKLTPSGLGKPIAVHSPILFFAQDREIADTAEAGDIIGIPNHGTLRVGDTLSEKNDVRFTGLPNFAPEILRRIALKDPTKTKQLRKALDDLSEEGVIQVFYPEIGSQWIVGVVGQLQLDVLVSRLEAEYKVEAR