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scnpilot_p_inoc_scaffold_4528_curated_3

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1711..2811)

Top 3 Functional Annotations

Value Algorithm Source
release factor H-coupled RctB family protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6DD7D similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 366.0
  • Bit_score: 636
  • Evalue 1.70e-179
Protein with similarity to rtcB {ECO:0000313|EMBL:GAO53237.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 366.0
  • Bit_score: 652
  • Evalue 4.10e-184
release factor h-coupled rctb family protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 362.0
  • Bit_score: 519
  • Evalue 1.20e-144

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGAGCAAGATCACCTTGATCGCCACCGATCCGTCGCGTTTCGATCCTCTCGCACTGGACCAGCTTGATGCCTGCGCACGCTATGCCGACATGGCGCGCATTGTGGGCCTGCCCGATCTACACGCAGGCAATGGTCTTGCGGTGGGTGCTGCCTTCTGGTCTCCGACCCGTATCTGGCCACATCTTGTGGGCAGCGACATTGGCTGCGGAATGGCCTTGTGGGAGACCGATTGCGCTCTGCGCAAATTCCGGATCGGCTCGGTCGAGCGTAAGCTGCGCGGGCTGGATGGGCCTTGGGCGGGTGATGGTGCAGCTATTCTGGCAGAGGCCGGGTTGCCGCCCCATCTGGCCAGCCCCGCTTTGGGCACCATCGGTGGAGGCAACCATTTCGTCGAATTCCAACGCATCGAGGCGGTGGTGGACGAGGCTCGCTTTGCCGAATTGGGCCTCCGGCGGGATCGCGTGTTGATAATGGTCCACAGCGGATCGCGCGGGCTGGGCCAGGCCATTCTGCAGGCCCATCGCCAGCCTGACGTCAGTCAAGGCATCCCCGCCAACAGCACAGAAGCCAGGGCATATCTGGCCGACCATGACGCCGCGCTGGGCTGGGCCATTCTCAACCGCCAGATCATCGCCCAGCGCTTTTGCGATAGTCTTGGAATTGGTGGGCGGCGCCTGCTGGATATCTGCCACAATAGCGTCACACCGCATCAGAGCGGGTGGCTGCATCGTAAAGGGGCAGCGCCGGCGGATCGGGGCGTAGTCACCATACCGGGCTCGCGGGGAAACTTCAGCTATCTGGTCGAGCCCAACGCGCAGGGCGCCGATCGTGCGCTCCATTCATTGGCCCATGGCGCGGGCCGCAAGTGGAGCCGCAAGGATGCCCATGCTCGCCTTTCCCGGCGGTTCAAGGTGGCCGATATGCAGCGCACCGGCCTTGGCAGCCATGTGATCTGCGAGGATCGCCGCCTGATCTTCGAGGAAGCGCCTGATGCCTACAAGGACATTGGCATGGTCATTGCCGATCTGGAGCAAGCGGGCCTGATCCGCGTCGTCGCCAAGCTTCGCCCCCTTCTGAGCTACAAGACGAGGGCTGTATGA
PROTEIN sequence
Length: 367
MSKITLIATDPSRFDPLALDQLDACARYADMARIVGLPDLHAGNGLAVGAAFWSPTRIWPHLVGSDIGCGMALWETDCALRKFRIGSVERKLRGLDGPWAGDGAAILAEAGLPPHLASPALGTIGGGNHFVEFQRIEAVVDEARFAELGLRRDRVLIMVHSGSRGLGQAILQAHRQPDVSQGIPANSTEARAYLADHDAALGWAILNRQIIAQRFCDSLGIGGRRLLDICHNSVTPHQSGWLHRKGAAPADRGVVTIPGSRGNFSYLVEPNAQGADRALHSLAHGAGRKWSRKDAHARLSRRFKVADMQRTGLGSHVICEDRRLIFEEAPDAYKDIGMVIADLEQAGLIRVVAKLRPLLSYKTRAV*