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scnpilot_p_inoc_scaffold_8997_curated_5

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2573..3217

Top 3 Functional Annotations

Value Algorithm Source
Putative AraC family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y768_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 170.0
  • Bit_score: 204
  • Evalue 9.50e-50
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAD49041.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 170.0
  • Bit_score: 204
  • Evalue 1.30e-49
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 172.0
  • Bit_score: 150
  • Evalue 5.10e-34

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGAATTGGGGGCGCGAAATGGATTGCCAGATCGACGTGCGCTTTTATCCGGCGCCGGCAGACCTGCGGGGCTGCTTTTCCTCATTTTACAGCGCAAGTTTTGCCGTGGCCGATGGCGGCCGCGTCAATGACCTCCTGCAGCCGGAATGGGCCAATATCCGTTTCTTCAGCGGTTCCCTGCCGGATGCCTGGGTGAAAGGTTCGGAAAGGGTGCGCGATGTGCGCTTCCTGGCCACGGGGCCCAGTTCCGTTCCCGTACATTTCGATCTGGGTACCACCCGGATGTGGGGCATCGGCCTGTTCCCGCTCGGTTGGGCCAAGTTCTGTCATGGCCCGGCCACGCAGGTCGCCAATATGGTGGTGGACGGGGCTGAACATCCCACTTTTGCCAATTTCCGGCAGCTCGCCGCCGATCTGTTCGAAGGCACGTCGGACGAGATGGAGGAGCTGGAACGGATCGTTGCCTGTTTCCGGGGCATGAACCGCGATGTGCCCGATCAGGAACGGATCGTGGCGGTTCACGCCGCGATGGTCGTCCGGCGGTGGCAACCGTGGCGGATTTCGCTGACCACACCGGCCTTGGTCGCCGCACGCTGGAGCGGTTGTGCCATCGCTATTTCGGCTTTTCTCCCAAGCTGCTGCTGA
PROTEIN sequence
Length: 215
VNWGREMDCQIDVRFYPAPADLRGCFSSFYSASFAVADGGRVNDLLQPEWANIRFFSGSLPDAWVKGSERVRDVRFLATGPSSVPVHFDLGTTRMWGIGLFPLGWAKFCHGPATQVANMVVDGAEHPTFANFRQLAADLFEGTSDEMEELERIVACFRGMNRDVPDQERIVAVHAAMVVRRWQPWRISLTTPALVAARWSGCAIAISAFLPSCC*