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scnpilot_p_inoc_scaffold_1007_curated_24

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(27032..28714)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 557.0
  • Bit_score: 966
  • Evalue 2.00e-278
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 555.0
  • Bit_score: 924
  • Evalue 1.90e-266
2-isopropylmalate synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YN00_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 557.0
  • Bit_score: 966
  • Evalue 1.40e-278

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGGCGATGCTCAAAAATCCTGGCGATAAATACCGGCCCTTCCCGCAGGTTCCGATCACGGACCGGCAATGGCCTTCCCGCACGATCACCAAGGCCCCGCGCTGGCTCTCCACCGATCTGCGCGACGGTAATCAGTCGATTATCGATCCGATGGATGCGGTGAAGAAGAACCGCTTCTTCGATACTCTGGTGGAAGTGGGTCTGAAGGAAATCGAAGTCGGTTTCCCCGCTGCTGGCAAGACCGAGTTCGACTTCATCCAGGGCCTCGTCCGCTCGGGCAAAATCCCTCAGGATGTGATGATCCAGGTGCTGACCCAGTCGCGCGAGGATCTGATCCGCACCAGCTTCGACAGTCTGGAAGGCGTCCACGCGGCCATCGTCCACCTCTATAACGCCGTGTCCCCCGCCTGGCGCGACATCGTGTTCCGCATGAGCAAGGCCGAAGTGAAGGAAATCGCCATCAAGGGGGCGAAAATCCTGCGCGACGAGGCTGCCAAGCGCCCTGATACGGACTGGTATTTCGAATATTCGCCCGAGACCTTCTCCACCGCCGAGCTGGATTTCAGCCTGGAGGTTTGCGAGGCGGTGATGGACGTGCTGCAGCCGACAGCGGATCACCAGTTGATCCTGAACCTGCCGGCCACGGTGGAGGCGGCAACGCCCAACGTCTATGCCGACCAGATCGAATATTTCTGCCGTAACATTCCCCGCCGCGAAACGGTGGCGATCAGCCTGCATACCCATAATGACCGGGGCACCGGTGTGGCCGCGGCCGAGTTGGGCCTGATGGCGGGGGCGGACCGCGTGGAAGGCTGCCTGTTCGGCAATGGCGAGCGCACCGGCAATTGCTGCCTGGTGACAGTCGGCCTCAACATGTACACGCAAGGTGTTGATCCAGAACTGGATTTCTCCGACATCGATGCGATCATCGAGACGGTAGAATATTGCAACCAGATCCCGGTCCATCAGCGGCACCCCTATGGCGGCGAGCTGGTGTTCACGGCCTTTTCCGGCAGCCATCAGGATGCGATCAAGAAGGGCTTCGAGGCGCAGTCCAAGCGCAACGATGAACTGTGGCAGGTTCCCTATCTGCCGATCGATCCCGCCGATCTGGGCCGCAATTACGAGGCGGTGATCCGCGTGAACTCGCAAAGCGGCAAGGGCGGTTTCGCCTGGGTGCTGGAGCAGGATCAGGGCCTGAAGCTGCCCAAGAAACTGCAGGCGGACTTTTCCAAGCATGTCCAGCGCATGGCCGACGAGTTGGGCCGCGAGTTGAACGCCGCCGATATCTGGCAAGTTTTCCGCGAAGCCTATTACATCAAGGTCGAAAAGCGCCGCTTCCGGCTGGTCTATTACGATGAAGGCCGCGCGGCGGATGGCACGCGCATCTTCACCGGCACGATTGAAGTGGACGGCAAGGAACAAAGCGTTTCCGGGCGCGGCAAGGGCCTGATCTCTTCCGTGCTGGCCACGCTGAAGGACAGCTTCGGACTGGAGATGGAAGTGCTCGATTATACCGAGCATGCGCTGGGCCAGGGCACTGATGCACAGGCAGCGGCCTATGTCGAATGCGCCCTGCCCGATGGCCGTGTGGTGTGGGGCGTGGGGATCGACGAGGATGTCGCCTCCGCCAGTGTCCGCGCGATCCTTTCCGCCGCAAACGGCGCGACGCGCCAGGCCTGA
PROTEIN sequence
Length: 561
MAMLKNPGDKYRPFPQVPITDRQWPSRTITKAPRWLSTDLRDGNQSIIDPMDAVKKNRFFDTLVEVGLKEIEVGFPAAGKTEFDFIQGLVRSGKIPQDVMIQVLTQSREDLIRTSFDSLEGVHAAIVHLYNAVSPAWRDIVFRMSKAEVKEIAIKGAKILRDEAAKRPDTDWYFEYSPETFSTAELDFSLEVCEAVMDVLQPTADHQLILNLPATVEAATPNVYADQIEYFCRNIPRRETVAISLHTHNDRGTGVAAAELGLMAGADRVEGCLFGNGERTGNCCLVTVGLNMYTQGVDPELDFSDIDAIIETVEYCNQIPVHQRHPYGGELVFTAFSGSHQDAIKKGFEAQSKRNDELWQVPYLPIDPADLGRNYEAVIRVNSQSGKGGFAWVLEQDQGLKLPKKLQADFSKHVQRMADELGRELNAADIWQVFREAYYIKVEKRRFRLVYYDEGRAADGTRIFTGTIEVDGKEQSVSGRGKGLISSVLATLKDSFGLEMEVLDYTEHALGQGTDAQAAAYVECALPDGRVVWGVGIDEDVASASVRAILSAANGATRQA*