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scnpilot_p_inoc_scaffold_5400_curated_7

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6657..7211

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 185.0
  • Bit_score: 308
  • Evalue 5.70e-81
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 186.0
  • Bit_score: 291
  • Evalue 1.60e-76
Formamidopyrimidine-DNA glycosylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKT2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 185.0
  • Bit_score: 307
  • Evalue 6.90e-81

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCGGAACTGCCCGAAGTTGAGACTACCGTGCGCGGACTTGCCCGTTTCCTGGAAGGGAAACGGATAGAACGCGTGGCCGTGAATCGGCCCGATTTGCGCCGCCCCTTTCCGCCCGATCTCGTCCAGTCGCTCACCGGGGCGACAGTCACGGGGCTGGGCCGCAGGGCGAAATACGGCCTGATCCACACGGATCGCGGGCAGACCATGGTGTTCCATCTGGGCATGAGCGGACGCTGGCGGATCGATCCGGCAGAGCAGGGCACGCATGACCATCTGCTGATCGAGACGGCAGGCCATCTCTTCGCCCTCAACGATGCACGGCGTTTCGGCTCGGTAGATCTCGTCGATACGGCGGCGTTGCAGGCATGGCCGCAATTCGCCGTCATGGGGCCCGAGCCGCTGGGCGAGGATCTGACGCCTGCCCATCTGCGCGCCGCACTGGCGGGCCGTTCCCAGGCGATCAAGCTCTTGCTGCTGGACCAGCGGATCGTGGCGGGCCTGGGCAATATCTATGTGTGCGAGGCGCTTTACCGTTCGGGCATCAGCCCGCAG
PROTEIN sequence
Length: 185
MPELPEVETTVRGLARFLEGKRIERVAVNRPDLRRPFPPDLVQSLTGATVTGLGRRAKYGLIHTDRGQTMVFHLGMSGRWRIDPAEQGTHDHLLIETAGHLFALNDARRFGSVDLVDTAALQAWPQFAVMGPEPLGEDLTPAHLRAALAGRSQAIKLLLLDQRIVAGLGNIYVCEALYRSGISPQ