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scnpilot_p_inoc_scaffold_8255_curated_1

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..300)

Top 3 Functional Annotations

Value Algorithm Source
Resistance nodulation cell division (RND) efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPY9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 136
  • Evalue 1.50e-29
resistance nodulation cell division (RND) efflux pump, MFP component similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 136
  • Evalue 4.70e-30
Resistance nodulation cell division (RND) efflux pump, MFP component {ECO:0000313|EMBL:AGB72135.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 98.0
  • Bit_score: 136
  • Evalue 2.10e-29

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGATGGGTGGCGGCCAGCCGCTGTTCACGCTGATCCAGGACGGCGCATTGGAACTGATCGCCGACGTCTCGGAAGGCGAGATCCTCAAGATCAAGGTCGGCCAGAAGGCGACCATCGCGCTTGCCGGCAGCCGCGAAACCCTGAACGGCAGCGTTCGCCTGGTTTCGCCCGCCATCGATGCCGTCTCGCGCCTCGGTTCCGTGCATATCGCCCTCGACGACAGCGAGAAGGCCCGCGCCGGCATGTATGGCAGCGCCACGATCATCGTCGAAACGGCTGATGGCATCGCCCTGCCGCTG
PROTEIN sequence
Length: 100
MMGGGQPLFTLIQDGALELIADVSEGEILKIKVGQKATIALAGSRETLNGSVRLVSPAIDAVSRLGSVHIALDDSEKARAGMYGSATIIVETADGIALPL