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scnpilot_p_inoc_scaffold_8255_curated_8

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 5146..5460

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM88_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 94.0
  • Bit_score: 95
  • Evalue 4.00e-17
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAD49805.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 94.0
  • Bit_score: 95
  • Evalue 5.60e-17
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 82.0
  • Bit_score: 84
  • Evalue 1.70e-14

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAAGGACTGGCGCCCGGATATCTCCAAGGGCAATGCGCCGGTTTATGAGCGTCTCGTCTCTGCGCTGGAGGGCGATGTGCGGGATGGTCGCCTGTCACCCGGTGACCGGCTGCCTCCGCAGCGCGATCTGGCACACCGCCTGTCCTTGAGCGTCGGCACCGTCAGCCGCGCTTATGTGGAAGCGGAGCGGCGNNNNNNNNNNNNNNNNNNNNCCATGTCGGCCGAGGTTCGTTCGTTGCCGACCGGGCGAGGCCGCATTCCTCCCCATATGACGCTGGTCCGCTCGACATGGCGCATAATGTGCCGCCGCTAG
PROTEIN sequence
Length: 105
MKDWRPDISKGNAPVYERLVSALEGDVRDGRLSPGDRLPPQRDLAHRLSLSVGTVSRAYVEAERXXXXXXXXMSAEVRSLPTGRGRIPPHMTLVRSTWRIMCRR*