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scnpilot_p_inoc_scaffold_1268_curated_1

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3..1778

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQC0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 588.0
  • Bit_score: 706
  • Evalue 2.10e-200
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 583.0
  • Bit_score: 735
  • Evalue 7.80e-209
surface antigen (D15); K07277 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 584.0
  • Bit_score: 704
  • Evalue 2.50e-200

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
CGGCGGGCATCTATGGCTATGCCGACGGCGGGCATCTATGGCTATGCCTTTGCCGATGTGCGGCCCGAGTTCAGCCGCAATCGCGACGATCTGACGATGAATGTGAAGTTCGTGCTCAACGAGGCGCCGCGCGTCTATGTCGAGGCGATCAACATCAACGGCAATACGCTGACCCAGGACAAGGTGGTGCGGCGCGAATTCCGCGTGGCCGAAGGCGATGCCTTCAACTCGCTGGCGGTCAAACGCTCCACCGCGCGCATCAATTCGCTCGGCTATTTCCAGGAAAACTTCAAGATCGAGCAAAGCCAGGGCTCCGCACCGGACCGCATCGTGCTCGACGCCAATGTCCAGGAACAGGCCACTGGCGAACTCCAGCTCTCCGCCGGTTTCTCAAGCCTCGAAAGCTTCATCCTGCAGGGTTCCATCAAGCAGCGGAATTTCCGCGGCAGGGGGCAGACGGTGGGCGCCAGCGTCAACTGGTCGCGTTATTCGCGGTCAGCCACGCTGAGCTTTACCGAACCCTATGTGTTCGATCGCAACATCTCGATGGGTATCGATATCTATCGGCGCGATATGAATAATTGGAACTATTATAATAACAATCGTAATTCTACCTTCAAGCAGGCTACCACCGGGTTCCAGGTCCGTGCGGGTATTCCGATTACTGAAAATGCTTCGGTCATCGGGCGTTACACGCTTAACTTCGACGACGTTACGCTGGATGAAGCGCTGTATTACAGCGACCGGGTGAATCCGCCGAACTTCGAGTGCGATGTCTTGCTTGCCGGCCGATATCTCTGCGATGCTATCGGTTCGCGGACCAGTTCGATTGTCGGTGTCTCGATGGTGTACGATACGCTGGATAACCGTGTACGTCCGACGCGAGGGGACACTTTCTCGATCAGTCTTGACGTTGCCGGTCTGGGCGGCTCGGAAAAATACGCGAAACTGCGCCTCAACGCAGCAAAATACTGGCAGATTGCCCCAGGCTGGGTTTTCTCGGTTTCCGCCGAGGGCGGTTATGTGAAGGGCTTCAAGGATCGCGGTGTCGGTCAGGATAGCGTTCGCCTGACGGACCGCTTCTTCCTGGGCGATCCGCAGATCCGCGGTTTCGACATTCGCGGTGTTGGCCCTCGTATTCTCCGCGAGTTTTATGTGCTCGACAACAATGGCAAGGCGGTGTGCGAGGATGGCACTTCGCAGGACAATTGCCAGAGCAATGGCGGTTATACGTTCTACAGCGATCCCAAGAACCCCATCGACGATCCGCTGGGCGGCGATGCCTATTACCTGACGCGTGCCGAACTGGAGATTCCGCTTGGAACCGGGGCTCGTGAAATGGGCCTGCGGCCTTCCATCTTTGTCGATGCAGGCGCCGTTTTCAGTGTGAGGAAGCCAATTCTGACTGACACGGGGCCGTCATATTTCATCCCCACGCGGGATAGCGATGGCAAACAGCTCTATACCCAGATCGATTCCGCATCGCTGGTGGATGGTATCTGTACGCCGGACAAGACCTCGACCGTGACCAATCCGACCAATCCAAGCAGGCCGGACTGTTTGACGAGTGCGGATAATATCGCGCTCGGCAGCACGCAGCGCGGTTTCAGGGAAGCTTTCCTGGGTGACTCGCCCAAACCGCGCATTGCCGTGGGTATCGGGGTAAATTGGAATTCGCCTTTCGGTCCATTCCGGATCGACGTTGCCAAGGTGTTGATGAAGCAGCCTGGCGATGACACCAAAACCTTCACGTTCAACGTAGGAACCCAATTCTGA
PROTEIN sequence
Length: 592
RRASMAMPTAGIYGYAFADVRPEFSRNRDDLTMNVKFVLNEAPRVYVEAININGNTLTQDKVVRREFRVAEGDAFNSLAVKRSTARINSLGYFQENFKIEQSQGSAPDRIVLDANVQEQATGELQLSAGFSSLESFILQGSIKQRNFRGRGQTVGASVNWSRYSRSATLSFTEPYVFDRNISMGIDIYRRDMNNWNYYNNNRNSTFKQATTGFQVRAGIPITENASVIGRYTLNFDDVTLDEALYYSDRVNPPNFECDVLLAGRYLCDAIGSRTSSIVGVSMVYDTLDNRVRPTRGDTFSISLDVAGLGGSEKYAKLRLNAAKYWQIAPGWVFSVSAEGGYVKGFKDRGVGQDSVRLTDRFFLGDPQIRGFDIRGVGPRILREFYVLDNNGKAVCEDGTSQDNCQSNGGYTFYSDPKNPIDDPLGGDAYYLTRAELEIPLGTGAREMGLRPSIFVDAGAVFSVRKPILTDTGPSYFIPTRDSDGKQLYTQIDSASLVDGICTPDKTSTVTNPTNPSRPDCLTSADNIALGSTQRGFREAFLGDSPKPRIAVGIGVNWNSPFGPFRIDVAKVLMKQPGDDTKTFTFNVGTQF*