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scnpilot_p_inoc_scaffold_78_curated

Search features with annotation key words

Displaying items 61-90 of 210 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_78_curated_61
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74394..75284)
DNA (891bp) protein (297aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=12553492 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_78_curated_62
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75367..77067)
DNA (1701bp) protein (567aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH0_ALIDB
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_78_curated_63
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77057..77617)
DNA (561bp) protein (187aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=2 Tax=Alicycliphilus denitrificans RepID=E8TQG9_ALIDB
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_78_curated_64
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77648..77803)
DNA (156bp) protein (52aa)
hypothetical protein id=12553495 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_78_curated_65
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77986..79059
DNA (1074bp) protein (358aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665, ECO:0000313|EMBL:CCQ74691.1}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665, ECO:0000313|EMBL:CCQ74691.1};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01665}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037B7BA1
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
scnpilot_p_inoc_scaffold_78_curated_66
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79111..79755)
DNA (645bp) protein (215aa)
Electron transport protein SCO1/SenC n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AAB8_ALKEH
electron transport protein SCO1/SenC; K07152
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_78_curated_67
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80009..80431
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HIH4_9PROT
hypothetical protein; K08976 putative membrane protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_78_curated_68
unknown

Not on your lists

80475..80699
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_78_curated_69
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(80837..81916)
DNA (1080bp) protein (360aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase D n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K266_STEMA
DNA ligase D {ECO:0000313|EMBL:AEM49361.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_p_inoc_scaffold_78_curated_70
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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82142..83524
DNA (1383bp) protein (461aa)
amino acid transporter n=1 Tax=Synechococcus sp. CB0205 RepID=UPI00020022AD
amino acid transporter
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
scnpilot_p_inoc_scaffold_78_curated_71
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83694..84845
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21FB2_SACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD82617.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
scnpilot_p_inoc_scaffold_78_curated_72
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84842..86752
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00037AD6E1
thioester reductase
Thioester reductase {ECO:0000313|EMBL:ACR11681.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredinibacter turnerae (strain ATCC 39867 / T7901).;"
scnpilot_p_inoc_scaffold_78_curated_73
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86749..87093
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCY9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87303.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_78_curated_74
RLO_PLX_64_10, Bacteria

Not on your lists

87292..94602
DNA (7311bp) protein (2437aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N288_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_p_inoc_scaffold_78_curated_75
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94648..95157
DNA (510bp) protein (170aa)
UPI0003CFB389 related cluster n=1 Tax=unknown RepID=UPI0003CFB389
Microcystin dependent protein {ECO:0000313|EMBL:ESZ40068.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
Tail Collar domain-containing protein
scnpilot_p_inoc_scaffold_78_curated_76
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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95167..95676
DNA (510bp) protein (170aa)
Microcystin dependent protein MdpB n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E22_RHILO
microcystin dependent protein MdpB
Microcystin dependent protein MdpB {ECO:0000313|EMBL:BAB51098.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_p_inoc_scaffold_78_curated_77
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95685..96203
DNA (519bp) protein (173aa)
Microcystin-dependent protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GR63_METAL
Microcystin-dependent protein {ECO:0000313|EMBL:EIC29890.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
Tail Collar domain-containing protein
scnpilot_p_inoc_scaffold_78_curated_78
unknown

Not on your lists

96220..96852
DNA (633bp) protein (211aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_78_curated_79
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96852..97418
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370DAAC
Uncharacterized protein {ECO:0000313|EMBL:KJV06158.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_78_curated_80
unknown

Not on your lists

comp(97458..97775)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B788ED
scnpilot_p_inoc_scaffold_78_curated_81
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97892..98968
DNA (1077bp) protein (359aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN47846.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
diguanylate cyclase id=2508244 bin=GWF1_Xanthomonadales_69_6 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
diguanylate cyclase
scnpilot_p_inoc_scaffold_78_curated_82
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99151..99933
DNA (783bp) protein (261aa)
gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q472A4_CUPPJ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AAZ60779.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_p_inoc_scaffold_78_curated_83
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100200..101564)
DNA (1365bp) protein (455aa)
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAN45514.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Putative glutamate cystein ligase protein id=2990042 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
glutamate--cysteine ligase, plant type
scnpilot_p_inoc_scaffold_78_curated_84
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101628..102272)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CB5A5
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
scnpilot_p_inoc_scaffold_78_curated_85
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102413..103066
DNA (654bp) protein (218aa)
Cytochrome c4 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W332_9GAMM
Cytochrome C {ECO:0000313|EMBL:KGI78789.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome c553
scnpilot_p_inoc_scaffold_78_curated_86
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103144..103788
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BA9AF
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_78_curated_87
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103850..104530
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BA9AF
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Thiol-disulfide isomerase and thioredoxins
scnpilot_p_inoc_scaffold_78_curated_88
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104642..105448
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003675E73
Endonuclease {ECO:0000313|EMBL:GAN45519.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
metal-dependent hydrolase
scnpilot_p_inoc_scaffold_78_curated_89
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105719..106306)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTK2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90543.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_78_curated_90
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(106303..107016)
DNA (714bp) protein (238aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase id=2739867 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Displaying items 61-90 of 210 in total

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