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scnpilot_p_inoc_scaffold_3641_curated_7

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(5263..5559)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Brachymonas chironomi RepID=UPI0003753198 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 96.0
  • Bit_score: 80
  • Evalue 9.60e-13
integration host factor, alpha subunit; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 97.0
  • Bit_score: 78
  • Evalue 1.10e-12
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 97.0
  • Bit_score: 78
  • Evalue 5.10e-12

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGAAGTTACGGAAGTTACCAAAGCCCAGATCATCAACATGGTGGCGGCCGACGCCAACCTGAACAGCAGAGAGGCCAAGCAAGCGATCGACGCCTTCATCAACATCGTCAAGATGCAACTGAGGAATCATCATGACGTGCATCTGACAGGCTTCGGTCGATTCCAGGTTCGTCCGACCACGCCCCGTGTGTGCCGGAATTTCCAGACGGGGGAAAAGATCACGACGGAACCGCGACTGCGCGCAACCTTTCGCCAGTCGACGACCCTCAAAGCGGTCATCAATGGGCGACGCTGA
PROTEIN sequence
Length: 99
MEVTEVTKAQIINMVAADANLNSREAKQAIDAFINIVKMQLRNHHDVHLTGFGRFQVRPTTPRVCRNFQTGEKITTEPRLRATFRQSTTLKAVINGRR*