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scnpilot_p_inoc_scaffold_78_curated_21

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22835..23398)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P44_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 148
  • Evalue 7.10e-33
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 148
  • Evalue 2.20e-33
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 188.0
  • Bit_score: 148
  • Evalue 9.90e-33

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCTGAATCCGGCGAGCACGATGTGACCCAGTTGATCGCCTCTTGGCGCGCCGGCGACGAGGCCGCGCGGGAGCTGCTGATGTCACTGGTCTACGCCAACGTGCGGGCCATTGCCGGACAGTCGCTGCGGCAGATGCCCGGCGGCACGCTGAGCGCGACGGATCTCGCCCACGAGGCGTTGATCCGCATGCTCGGCACCGATGCCCCATGGGAAAGTCGCAAGCATTTCTATCATGTCGTCGCCCAGGCAACCCGCCAGGTGCTGGTCGATGGCGCACGCAAGCGCATGGCGCAAAAGCGTGGCAGCGGTGCCGAGCACGTCGAACTCGATGCCGCCCTCGATCTGGGCACCCTGCAAAGCGACAGCACGCTGGTGCGGCTGAATGGCGCACTCGACGAGCTGGCCGACAATCATTCCCGTCGCGCGCAAATGGTCGAGCTTGTCTATTTCGGCGGCTTGAACCGGATTGAAGTCGCTGCGACCCTCGAAGTATCCGAGGGCACGGTCGATCGTGACCTGCGCCTCGCCCGCGCCTGGCTGCGCGCCGCGCTGGAGGCATGA
PROTEIN sequence
Length: 188
MAESGEHDVTQLIASWRAGDEAARELLMSLVYANVRAIAGQSLRQMPGGTLSATDLAHEALIRMLGTDAPWESRKHFYHVVAQATRQVLVDGARKRMAQKRGSGAEHVELDAALDLGTLQSDSTLVRLNGALDELADNHSRRAQMVELVYFGGLNRIEVAATLEVSEGTVDRDLRLARAWLRAALEA*