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scnpilot_p_inoc_scaffold_275_curated_6

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3433..4410

Top 3 Functional Annotations

Value Algorithm Source
TIR domain-containing protein n=1 Tax=Pseudomonas sp. GM80 RepID=J2YCM9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 328.0
  • Bit_score: 325
  • Evalue 5.60e-86
TIR domain-containing protein {ECO:0000313|EMBL:EJN34320.1}; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 328.0
  • Bit_score: 325
  • Evalue 7.90e-86
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 333.0
  • Bit_score: 322
  • Evalue 1.10e-85

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Taxonomy

Pseudomonas sp. GM80 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGCAGCACGCGTCTTCTTCTCGTATTCGCACGACGACGAGCAACATCGCAATCAGCTCGACAAGCACTTAGCCCTCCTGAGCAGACAGGGACTCATCGAGACTTGGCATGACCGGAACATTCCGGCCGGCGGTCAGCTGGATGACCACATCGACCAGGAAGTCAATCGTGCCGACATCATTTTGCTGCTGGTGAGCGCCAGCTTCATCGCATCGGCTTACTGCTATTCGCGTGAGATGGCCCGTGCGATGGAACGCCATGAGGCGGGCGAGGCACGCGTGGTGCCCATCATCGTGCGCGATTGCGATTGGCACAGCGCACCCTTCGGGAAATTGAAGGCCGTGCCGACCGACGGAAAGGCCATCGTGTCTTGGACCAACTTCGACGCCGCATACACCGACGTGGCCAAGGAGATTCGGCGCCTCGTCGAACCCGTCAGCGGGTCACGTGGCATGGTGGTGGGTGCGATGACACGATCTCAGCACCGCGCAACCCTTCCTCAGGCCGAATCTAGTCGTAGCCCGGCAGCGTTGGGTCCGCGCTCGGGAAACCTGCGGGTGAGGCGGGAGTTTTCCGACCATGACAAGGCTCAGTTTCAGCAGGACACTTTCGATTTCATAGCCCGGTACTTTGAGAACTCACTTGCGGAGTTATCTGCACGTCATACGCATATCCAAGGAGACTTTCGACGTATCGATGCGCATACCTTCCATGCCATCCTCTATCAGCATGGCAAGCAGGTGTCGGCTTGTGCGGTGCATCTAGAACGTGGAGGTGCGTTCGGCAGTGGTATCCGCTATTCGTCCGCGCTCGGACCGGGCAACAGCTTCAATGAACAATTGACCGTGGCGCATGACGACCAGTCCTTGTTTCTGCAGTCGATGGGCGCGGCAGCAATGAGTGGTCGCGAAGAATCCCTGACCAGCGAAGGTGGTGCAGAATTGTTTTGGTCGATGTTGATTCGGCCCATTCAATAG
PROTEIN sequence
Length: 326
MAARVFFSYSHDDEQHRNQLDKHLALLSRQGLIETWHDRNIPAGGQLDDHIDQEVNRADIILLLVSASFIASAYCYSREMARAMERHEAGEARVVPIIVRDCDWHSAPFGKLKAVPTDGKAIVSWTNFDAAYTDVAKEIRRLVEPVSGSRGMVVGAMTRSQHRATLPQAESSRSPAALGPRSGNLRVRREFSDHDKAQFQQDTFDFIARYFENSLAELSARHTHIQGDFRRIDAHTFHAILYQHGKQVSACAVHLERGGAFGSGIRYSSALGPGNSFNEQLTVAHDDQSLFLQSMGAAAMSGREESLTSEGGAELFWSMLIRPIQ*