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scnpilot_p_inoc_scaffold_240_curated_118

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 106799..107269

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding protein n=1 Tax=Methylotenera RepID=UPI00035D98B2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 171.0
  • Bit_score: 119
  • Evalue 3.80e-24
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 167.0
  • Bit_score: 118
  • Evalue 1.20e-23
ssb; single-stranded DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 115
  • Evalue 1.30e-23

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAAGCACGTCAACAAGGCGATCCTTCTCGGGAATGTCGGTAGCGACCCGAAGATTGGTAATGGTGTGGCACGGTTTCGTCTCGCCACGAACCGCGTCTGGCGCGACAAAGATGGCGTAAAGCAGGAACGCACCACGTGGACAACGTGCGTGGCGTTCGGGAAGCTGGCGGACATTGTCGGTGACTATGTCAAGAAGGGTGCCGCTGTCCATGTAATCGGCTACGCAGACACCCGTGAGTACGAGAAGGACGGCCAGAAACGGGAAGCCTACGAAGTCATCATCGAGGACTTGTCGCTGGTTTCCAGTCCAGGCGCATCGTCCTCGCAGGGTTCCGGTCAGCGCAATCAGGCACCGGCACCGTCCCCCTCCCGTCAGCAGTCCTCGAGTTCGCGCACCCCTGCACCACAGCATCGCGGTGAAGTGGACGGGGATTTCAATGACGCGGGCTTTGACGATTATCCGCTCTAG
PROTEIN sequence
Length: 157
MKHVNKAILLGNVGSDPKIGNGVARFRLATNRVWRDKDGVKQERTTWTTCVAFGKLADIVGDYVKKGAAVHVIGYADTREYEKDGQKREAYEVIIEDLSLVSSPGASSSQGSGQRNQAPAPSPSRQQSSSSRTPAPQHRGEVDGDFNDAGFDDYPL*