ggKbase home page

SCNpilot_BF_INOC_scaffold_13232_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(182..1036)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBL6_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 141.0
  • Bit_score: 238
  • Evalue 7.90e-60
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 141.0
  • Bit_score: 238
  • Evalue 2.20e-60
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADG74111.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fl similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 141.0
  • Bit_score: 238
  • Evalue 1.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCGAGGACGACGTGGACACGACGCGGGTGCCCGCCGACGAGGACGAGGCGGCTCGCACGCGCCGGTTCGAGGCGGAGGCACTGGTCTACCTGGACCAGCTCTACGGGGCTGCCCTGCGCATGACGCGCAACGCCGCCGACGCCGAGGACCTGGTGCAGGAGACCTTCACGAAGGCGTTCGCCGCCTTCCACCAGTACCGGCCGGGCACCAACCTCAAGGCGTGGCTGTACCGGATCCTCACCAACACGTACATCAACTCCTACCGCCGCAAGCAGCGCGAACCCATCCAGTCCCACACCGACCAGGTCGAGGACTGGCAGCTGGCCAAGGCGGAGTCGCACTCCTCGACCGGGCTGCGCTCGGCCGAGGCCGAGGCCCTCGACCACCTGCCGGACTCCGACGTCAAGGCCGCGCTCCGAGATCATGGGCACCCCGATCGGGACGGTGATGTCCCGCCTGCACCGGGGCCGCGCCCAGCTCCGCGAGCTGTTGCACGACTACGCCCAGGAGCGCGGCCTCGTCGCGGCCGGCCCGGGCGATCCGGAGGGAAGGCCATGACCGACGACGACCGCGCGGTGGACGACGAGGCCCACGCGCCGCTGACGATCGACGAGGACCCCTGCTCGGCCGCGCTCCAGAGGCTGTGGAGCTACCTCGACAAGGAGCTGACCCCCGCCGACGAGGACGACCTGCGCGACCACCTCGCGGGCTGCCCGCCGTGCCTGGCGGAGTACAGCATCGACGTGGTGCTCAAGAGCATCGTGCGTCGCTCCTGCCAGGAGGAGGCGCCGGCGGGCCTGCGGGTGCGCATCCAGCAGACGCTGCTGCAGGTCCGCGTCGCCGACCAGTAG
PROTEIN sequence
Length: 285
MSEDDVDTTRVPADEDEAARTRRFEAEALVYLDQLYGAALRMTRNAADAEDLVQETFTKAFAAFHQYRPGTNLKAWLYRILTNTYINSYRRKQREPIQSHTDQVEDWQLAKAESHSSTGLRSAEAEALDHLPDSDVKAALRDHGHPDRDGDVPPAPGPRPAPRAVARLRPGARPRRGRPGRSGGKAMTDDDRAVDDEAHAPLTIDEDPCSAALQRLWSYLDKELTPADEDDLRDHLAGCPPCLAEYSIDVVLKSIVRRSCQEEAPAGLRVRIQQTLLQVRVADQ*