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SCNpilot_BF_INOC_scaffold_15895_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 421..1275

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036608EC similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 278.0
  • Bit_score: 420
  • Evalue 1.10e-114
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35269.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 278.0
  • Bit_score: 361
  • Evalue 1.10e-96
two component transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 264.0
  • Bit_score: 325
  • Evalue 1.80e-86

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGTCTTACTGGTCGACCACCCCACCGCGGCGCGCGCACATCCTCGTCATCGATGACAACATCGAGGAGCTGCAGTTGCTGCTGGGCGCGCTGCGCGGCGCGGGCCACCGCATCAGCCTCGCGTTCGACGCGCTGCAGGGCTACCGCCGCGTCACCGCCCTGCAGCCCGACCTGGTGCTGCTGGACGTGCGCATGGGCTCGACCGACGGCTTCACCACCTGCAGGCTGCTGAAGGCCGACAGCGCCACCGCGCGCATCCCGGTGATCTTCCTGACTTCGTCGAGCGCGGTGGACGAGCGCATCACCGGCCTGCGCGATGGCGCGGTCGACTACATCCTCAAGCCCTTCGACCCGGCCGAAGTGCTGGCGCGCGTGGCGGTGCACCTGGCGCTGGCCAGCAGCAGCAGCCATGCGCAGGAGTGCATGGCGCAGGCCGAGAGCGTGCTGGAGAACGCGCGCTCGGACAACGCCGACCGCGTGATCGCGCAGGCGACCGAACGGCTGGTTCTGTCGGATCTGGCAAGCGTGCCCGCGCTGCCCGAGCTGGCGGCACGCGTGGGCACGCACGAGAAGCGGCTGACGCGCGCATTCCGCGAGCAGACCGGGCGCACGGTGTACGAGTTCGTGCGCGAGATGCGGCTGGTGGAAGCCCAGCGCCTGCTGCTGAACTCCGCGCTCAACATGGAAGAAGTGGCGCATGCGGTGGGCTTCTCCGGCGCGGCCAATTTCTCGACCGCGTTCCGCGAGCGCTTCGGGCTCACGCCTTCTTCCTATCGCAACGCACGAGCCGCCCGGCCGATGCCGCCGTTCATGCCTGTGGCGGCGCCATCGACTCTGCCGGCGCCGTCTGCCTGA
PROTEIN sequence
Length: 285
MSYWSTTPPRRAHILVIDDNIEELQLLLGALRGAGHRISLAFDALQGYRRVTALQPDLVLLDVRMGSTDGFTTCRLLKADSATARIPVIFLTSSSAVDERITGLRDGAVDYILKPFDPAEVLARVAVHLALASSSSHAQECMAQAESVLENARSDNADRVIAQATERLVLSDLASVPALPELAARVGTHEKRLTRAFREQTGRTVYEFVREMRLVEAQRLLLNSALNMEEVAHAVGFSGAANFSTAFRERFGLTPSSYRNARAARPMPPFMPVAAPSTLPAPSA*