ggKbase home page

SCNpilot_BF_INOC_scaffold_17264_4

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1369..2046

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9B9_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 245.0
  • Bit_score: 96
  • Evalue 3.80e-17
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ETA71160.1}; TaxID=479430 species="Bacteria; Actinobacteria; Catenulisporales; Actinospicaceae; Actinospica.;" source="Actinospica robini similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 223.0
  • Bit_score: 279
  • Evalue 5.90e-72
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 245.0
  • Bit_score: 96
  • Evalue 1.40e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinospica robiniae → Actinospica → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGAGCAGTCAGCACGCGGTGCCCGGCGCCGCCGACCGGGCGCGGCTGGTCGCGGCGCACTCCGGCCTCGTCGACCGCGAGGTCGCGCGGTACCGGACGTGGCGGGTCGACCGGGCGGACCTGCGTCAGGCGGGGATCCTCGGGCTGCTCATCGCCGCCGGGCGGTTCGACCCGGACCGTGCCGTGCCGTTCGGTGCCTACGCGCACACCTGGGTGCGCAAGGAGATCCAGCGGGCCATCGCGCGGCAGGAGTTCCCCGCGGTCGTGCCCAGCGACCTGGTCGGGCGCACGGTCGCGGTACGCCGCGCGCTCGACGAGAACGCGGACAGCCTGAACCTCGCCGCCGCCGCGCTGGGCATCTCGGCGGCGACCGTCGCCGCGCTCCATCGGCAGCTGCGCACGGATCCCGTCGAGGAGGACGAGGACTTGCCGGCGCCGGGCTACCCCCTGGCCGACCCGCAGGACGTCGCGGTCGCGCGGGACTTCGTCAGTGCGGTGCGCAGCGGCCTGGTCCGCATGGACCCGCGCGCGGCCGAGGCGCTGGTCCTGCGCTACGGCCTCGACGACGGCGCGGAGTGGTCGTACCGCAGGATCGGCCGCCACCTCGGCACCTCCGACCACACGGCCCGGACGCTCGTGGAGCGCGCGCAGGCCGAGCTCCGTCGTCTCCTCGACTGA
PROTEIN sequence
Length: 226
VSSQHAVPGAADRARLVAAHSGLVDREVARYRTWRVDRADLRQAGILGLLIAAGRFDPDRAVPFGAYAHTWVRKEIQRAIARQEFPAVVPSDLVGRTVAVRRALDENADSLNLAAAALGISAATVAALHRQLRTDPVEEDEDLPAPGYPLADPQDVAVARDFVSAVRSGLVRMDPRAAEALVLRYGLDDGAEWSYRRIGRHLGTSDHTARTLVERAQAELRRLLD*