ggKbase home page

SCNpilot_BF_INOC_scaffold_17572_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(1216..1890)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigW n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0A9_MODMB similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 3.60e-68
sigW; RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 1.00e-68
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:CCH89072.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 229.0
  • Bit_score: 265
  • Evalue 5.10e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Modestobacter multiseptatus → Modestobacter → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
CCGACCGGCCAGGACGCGGTCCGCTGGCTCCAGCCGTACCCCGACGAGGCGCTCGCCGAGATCGCGGACGACGTCCCGGGACCGGAGGCCCGCTACGAGTCCCGCGAGGCGATCTCGCTCGCGTTCGTCCGGGCCCTCCAGCTGCTGCCGCCGGCTCAGCGTGCGGCGCTGCTCCTGCGCGACGTGCTCGGCTACCCCGCGGTCGAGGCGGCGCAGCTGCTCGACGTGACCGTCGACTCGCTCAACGGCTCGCTCAAGCGTGCGAGGGCCGCGCTCGCGGGCACCGGCACGCGGGCCGCCGGGGACCCGGACCCGGAGCTGCTCGAGCGCTTCGTCGCCGCGTTCACGGCCGGCGCGGTCGACGAGCTCGTCGCGCTCATGACCGACGACGTCTGGGTGCGGATGCCGCCGCTGCCGTTCGAGTACCGCGGACCGCTGGCCGCGGGCGGCTTCTTCGCGGCGATGGCGGCGCACCGGCGCACCATCGAGCGGATGGTGCCCGTCGGAGCGAACCGCCAGCCGGCCTGGGGCGAGTACGTCCGTGACCCGGTCGCCGGCGGCCTGCACCTCGTCGGGGTGCTCGTCGTGCGCGTCCGCGACGGCCTCGTCGACGAGGTGACGCACTTCGAGCCCGCGACGGCCGCCGCCCTGGGCCTGCCGAGGACGCTCGACTGA
PROTEIN sequence
Length: 225
PTGQDAVRWLQPYPDEALAEIADDVPGPEARYESREAISLAFVRALQLLPPAQRAALLLRDVLGYPAVEAAQLLDVTVDSLNGSLKRARAALAGTGTRAAGDPDPELLERFVAAFTAGAVDELVALMTDDVWVRMPPLPFEYRGPLAAGGFFAAMAAHRRTIERMVPVGANRQPAWGEYVRDPVAGGLHLVGVLVVRVRDGLVDEVTHFEPATAAALGLPRTLD*