ggKbase home page

SCNpilot_BF_INOC_scaffold_20482_3

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1651..2259

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 187.0
  • Bit_score: 344
  • Evalue 1.00e-91
Pseudouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIP1_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 187.0
  • Bit_score: 344
  • Evalue 7.30e-92
pseudouridine synthase, Rsu similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 187.0
  • Bit_score: 344
  • Evalue 2.10e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGTCAGCCGTTGCCCGAGCGCGAGCGTACCCGGCTGTTTCTCTATCACAAGCCGCGCGGCCGTGTTCGACAATCTGCCGGCAGGTCTGCCGCGGCTGATCAGCGTCGGCCGGCTCGACTTCAACACCGAAGGATTGCTGCTGCTGACCAATGACGGCGGTCTGGCGCGCGCGCTGGAACTGCCGGACACCGGCTGGCTCAGGCGTTACCGCGTCCGCGCCCACGGCGAGGTGACGCAGGCGCAACTCGATGCGCTGAAGCATGGCGTCGAGGTCGACGGCGTCAAATACGGCTCGATCGACGCCACGCTCGAGCGTGATCAGGGCGCGAATGTGTGGCTGACGTTCGCGATCCGCGAGGGCAAGAACCGCGAGGTGCGCAACGTGATGGCGCATCTCGGACTGGAGGTGAACCGGCTGATCCGTATTTCCTACGGTCCGTTTCAACTGGCCGAGATCGCGGAAGGTGAGGTCGAGGAAGTCAAGACCCGCGTGCTGCGCGAGCAACTCGGCGACAAGATCGCAGCGCTCGCCAACGCGAATTTCGCCGGCGCCGCCGCCGAAGCCGATGCTCCCAAGCTCGGCCGCGACGGCACGCCGCTGCGCTCT
PROTEIN sequence
Length: 203
MVSRCPSASVPGCFSITSRAAVFDNLPAGLPRLISVGRLDFNTEGLLLLTNDGGLARALELPDTGWLRRYRVRAHGEVTQAQLDALKHGVEVDGVKYGSIDATLERDQGANVWLTFAIREGKNREVRNVMAHLGLEVNRLIRISYGPFQLAEIAEGEVEEVKTRVLREQLGDKIAALANANFAGAAAEADAPKLGRDGTPLRS