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SCNpilot_BF_INOC_scaffold_21320_3

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(1178..1666)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S489_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 167.0
  • Bit_score: 107
  • Evalue 1.60e-20
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 169.0
  • Bit_score: 108
  • Evalue 2.60e-21
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB75079.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geod similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 169.0
  • Bit_score: 108
  • Evalue 1.30e-20

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GTGGCGCGCCACGGCCTCGCGGTCCGCGCCGCGGTGCGCGCCTTCCGGCTCCAGGACGCGGACGCCGCCGACGCCGTCCAGAACACCTGGGTGCGGCTGCTGGAGCGCGGCGGAACGATCCGTGACCCGCAGCGGCTGCGCGGCTGGCTCGTCCATACCGCGGGCCGGGAGTGCCTCGCGCTGCTGCGCCGCCGGCGCCGCGAGCTGCCCACCGACGTCGGCCTCGACGAGATCGCCGCGCTCGTCCCCGGACCGGAAGCCGTCGCCATCGCCGCGGACGTGCGCCGGGTCGTCGCCGACGTCGTCGCGGACCTGTCGGGGCGGCGCCGCCAGGTCGTCGACGCGCTGTTCTACCTGCCCGGCGACGGGTACGCGGTGCTGCGCGACTGCGGCATCCCGCACGGCAGCATCGGCCCGACGCGCGGCCGGCTGTTGCGCGACCTGCGCGGCGCCATGCGCACCCGCGAGATCGACGCCGCGGTCGCCTGA
PROTEIN sequence
Length: 163
VARHGLAVRAAVRAFRLQDADAADAVQNTWVRLLERGGTIRDPQRLRGWLVHTAGRECLALLRRRRRELPTDVGLDEIAALVPGPEAVAIAADVRRVVADVVADLSGRRRQVVDALFYLPGDGYAVLRDCGIPHGSIGPTRGRLLRDLRGAMRTREIDAAVA*