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SCNpilot_BF_INOC_scaffold_23004_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(51..620)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP83_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 5.00e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 1.40e-34
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU60519.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 6.90e-34

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGGATAATTGTACTTCCCATAAAGAACTTTTATTAGGACTCAACCTGGGGCATGAATATGCATTTGAACAGGTTTTCAAGTTGCATTTTGGAGAGATATGTTACTTTGTTGAGAAACTTACTGGGAGCCCGTTCGTGGCAGAAGATATCGTTGCGACCATTTTTCTGAAGTTATGGGAGAAAAAGCCTGAATTCGAATCGCTCCAAAAATTGAAAGCCTATCTTTTTATAGTATCACGGAACGCCTCACTGGATTATCTAAGGGCTAAAAGATTACATGATCACCTGCACAAAAATATTCGGTACACCAATAGCACATTTGAAAATGGAATTGAACGCAAAATTGTTCGGTCAGAAGCTTTTTATTTAATTTATGCCGAAATAAAAAATCTTCCTCGACAAGTCAGGGAAATAATCCGTCTGTCATTTGTTGATGGTCTATCAGTTCCAGAAATCGTTAATAAACTTGGGCTTGCTTATCAGACGGTACAAAATCAAAAATCTAAAGGTATAAAACTTCTGAGGAAAGCTATTATAAAAGATAATTTGATTTCTCCCCTTTGCTTATAA
PROTEIN sequence
Length: 190
MDNCTSHKELLLGLNLGHEYAFEQVFKLHFGEICYFVEKLTGSPFVAEDIVATIFLKLWEKKPEFESLQKLKAYLFIVSRNASLDYLRAKRLHDHLHKNIRYTNSTFENGIERKIVRSEAFYLIYAEIKNLPRQVREIIRLSFVDGLSVPEIVNKLGLAYQTVQNQKSKGIKLLRKAIIKDNLISPLCL*