ggKbase home page

SCNpilot_BF_INOC_scaffold_25163_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 94..1155

Top 3 Functional Annotations

Value Algorithm Source
Pectate lyase (Fragment) n=1 Tax=Cellulosilyticum ruminicola RepID=D2KFP9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 281.0
  • Bit_score: 248
  • Evalue 7.30e-63
Endo-1,4-beta-xylanase A {ECO:0000313|EMBL:GAO29526.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 359.0
  • Bit_score: 336
  • Evalue 6.30e-89
Pectate lyase/Amb allergen similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 367.0
  • Bit_score: 235
  • Evalue 1.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1062
ATGCCTACCTTTTCGAAAGAAGATGGCGGAATCATTAAAGCATTCAATAACTACATGACGGGACAGCGCAGATTTGTGGCTTATGGTGCATCCGGATTTCCTAACCCGACGGTTGATTTTGATGCTTATGTAGCAACAAGTCGTGACGAAACAGTTCCTTCAATAATAAAATCATACAGGGGCTCTAACACCTACAATAATTTCGACACCAATCCCTCGGTTATGTATGCTTACACTCCTGATAGCCCGGAAGCTGCCCGTGACAAAATCGTGCAATATGCAGGACGCATGCATGGTGGTGATTTCAAATGGACTTTTAACAACGCTGTGGATGATACTTCCTATGATGTAAACCCAGCGCTTAAATCTGCGCTTACCAGTTATAAAACAAGTCTGGTTGCTGTTCAGGGTGAAAATGCCCCTGTAGGTGGAGGAGACGACGATGATGATGACAACGGAACTATCAATCCGGGTACAACAGCACACAATTTTACGCTTTCAGGAAAAACAAGTTCATACTTTAATATTACCGGTAACCTTTCTGATTCGAAGGGAACAGTGAATTATGCCGGACTGACACTCAGCATCTGTCTGAAAATTGAATCTTCAACTTCGATTTCATTCTCTATTGCTGAAGAATCGACATTAACATTGGTTTTCAACGATGGATTTAATGGAAGAATTAAGATTAACGGAACTGATTACAATGCTTCTAACGGCATCTTAACGCTTAATATTGCTGCCGGAAGCTATACTATAACTAAGAATGACACCAGTAATTTATTCTATATAAGTGTAAAAAGTAACACAACATCTTCAATAGAAAATATTCAGGATGCGAATATCCGGATATATCCTAATCCGGTTGTGAATCAGCTACATGTTCAGGCAAATTCGCCGGTCAAACAGCTCAGCCTGATAAATTTGACAGGCACTATCGTAATGCAGGCTGAAGGGAACAATGTAGAATTCATTGATGTAAGTCAACTGAAAAACGGAACATATCTGCTTACGGTTCAAACGACAAAAGGTGTTTATAATCAGAAAATCATCAAGAAATAG
PROTEIN sequence
Length: 354
MPTFSKEDGGIIKAFNNYMTGQRRFVAYGASGFPNPTVDFDAYVATSRDETVPSIIKSYRGSNTYNNFDTNPSVMYAYTPDSPEAARDKIVQYAGRMHGGDFKWTFNNAVDDTSYDVNPALKSALTSYKTSLVAVQGENAPVGGGDDDDDDNGTINPGTTAHNFTLSGKTSSYFNITGNLSDSKGTVNYAGLTLSICLKIESSTSISFSIAEESTLTLVFNDGFNGRIKINGTDYNASNGILTLNIAAGSYTITKNDTSNLFYISVKSNTTSSIENIQDANIRIYPNPVVNQLHVQANSPVKQLSLINLTGTIVMQAEGNNVEFIDVSQLKNGTYLLTVQTTKGVYNQKIIKK*