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SCNpilot_BF_INOC_scaffold_2825_6

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 5971..6474

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9K3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 168.0
  • Bit_score: 192
  • Evalue 2.90e-46
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 168.0
  • Bit_score: 191
  • Evalue 2.40e-46
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU35051.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 168.0
  • Bit_score: 191
  • Evalue 1.20e-45

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGGTCGCTCGTTATTACCGCGAACTGCAGGCCCTGTTGGCCCGCACGCTGAAAGACCGCCATGCCGCCGACGACGTGGTGCAGGAGGCGTATGCGCGTGTGCTCGCGCTGCGTCACGCTGGCCAGCCCGTGGAGAAATTCCGCTCGGTGCTGCACCGCGCGGCCTACAACCTGGTCATCGACCGTAGCCGCCGCGCCCGGCTGCGCGACCATGACGACCTGGACGCCCTGCCTGAGGCCGCGCACCCCGCCGCCGCCGAAGCCACGCAGCCCGACGCGATCCTCGCCAGCGCGCAGCGCGCCCGCGCCCTGGTGGCCACCATCGAGGCCCTGCCGCCGCGCTGCCGCGAGGCCTTCGTGCTGCACAAGATCGACGGCTACACCCAGCCCGAGGTGGCCGCTCGCATGGGTATTTCGCTCAACATGGTGGAGCGCCACATCATGCGTGGCATGGACGCCTGCCGCGCCTGTATGGATGCCCTGGATGGCACCGGCGCACAATGA
PROTEIN sequence
Length: 168
VVARYYRELQALLARTLKDRHAADDVVQEAYARVLALRHAGQPVEKFRSVLHRAAYNLVIDRSRRARLRDHDDLDALPEAAHPAAAEATQPDAILASAQRARALVATIEALPPRCREAFVLHKIDGYTQPEVAARMGISLNMVERHIMRGMDACRACMDALDGTGAQ*