ggKbase home page

SCNpilot_BF_INOC_scaffold_29504_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 161..1099

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003629541 similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 308.0
  • Bit_score: 233
  • Evalue 2.80e-58
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 308.0
  • Bit_score: 227
  • Evalue 7.40e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47469.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 308.0
  • Bit_score: 227
  • Evalue 3.70e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGAATTTATCGGTCCGCCAGCTGCGCGCCTTCGTCGAGGTGGCGCGCCTGGCCAGCTTCACGCGGGCGGCCGAGCGCGTGCACGTCACGCAGGCGGGGCTGAGCGCGATGATCCGCGAGCTCGAGGCGCAGCTCGGCGCGCGCCTGTTCGAGCGCACCACCCGCTCGGTGACGCCGACCTCGGCCGGGCGCGCGCTGCTGCCCAGCGCCGAGCGCGTGCTCGCCGAGCTGGAGCGCGCGCGTGAGCGCATCGCCCGCATCGACAGCGCCGCGTCGGCCCGCGTGGCGGTCACCGCGCTGATCGCCGCCCACGTGTTGCCGCCGGTGATCGCGCGGCTGCACGCCGCCCACCCCGGGGTGGCGCTCGACATCGTGGACGCCGGGCCCCAGGAGATGCAGCGCATGGTCGAGCGCGACGAGGTCGATCTCGCACTGGGCGCCTTCCTGCGGCCGGCCGCCGGCATCGAGCGGGTGGCGGTGTTCCGTTTCGGCCTGGCGCTCGCCACGCTGCCTTCGCATCCGGGGCTGGCGCAGCGCGCCGGCGGGTCGCCGGGGCGCGGCGGCGGCACGCTCCCCTGGCAGCGGCTGCGCGGCGAGCCGCTGATCGGGCTGGCTGCCGACAACCTGCTGCAGCAGCGCATCGACGTCGTGCTCGCGCGCCACGGCGTCGAGCCCTCGATCGCGGCGCGCTTCAACACCCTCGAGACGGTGCTCGCCATGGCGGCGGCCGGCATCGGCTCGGCGATCGTGCCCACCTTCACCCGCCCGGCCTGCCGGCGCTACGGCCTGCGCATGATCGGGCTGCGCGCGCCCGAAGCCGGGTTCGACTTCTACCGGATCAGCCGCAAGGGCGCCGCGTTCGGGCCGGCCGTGGCGCTGCTGATCGGGCTGCTGCGCGAGGAGGTCGACGCCATCGCAGCCGGGGCGCGCGAGCCGTGA
PROTEIN sequence
Length: 313
VNLSVRQLRAFVEVARLASFTRAAERVHVTQAGLSAMIRELEAQLGARLFERTTRSVTPTSAGRALLPSAERVLAELERARERIARIDSAASARVAVTALIAAHVLPPVIARLHAAHPGVALDIVDAGPQEMQRMVERDEVDLALGAFLRPAAGIERVAVFRFGLALATLPSHPGLAQRAGGSPGRGGGTLPWQRLRGEPLIGLAADNLLQQRIDVVLARHGVEPSIAARFNTLETVLAMAAAGIGSAIVPTFTRPACRRYGLRMIGLRAPEAGFDFYRISRKGAAFGPAVALLIGLLREEVDAIAAGAREP*