ggKbase home page

SCNpilot_BF_INOC_scaffold_32857_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(470..1240)

Top 3 Functional Annotations

Value Algorithm Source
ADP-heptose:LPS heptosyltransferase II n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JGW5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 243.0
  • Bit_score: 269
  • Evalue 3.80e-69
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KIZ50155.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 252.0
  • Bit_score: 270
  • Evalue 3.10e-69
ADP-heptose--LPS heptosyltransferase similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 257.0
  • Bit_score: 262
  • Evalue 1.30e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas oryzihabitans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATCGTGTTGCCGGGCTCGCTCAAGGCGGCGATCCCGCCATGGGCGGCCGGCATTCGGGAGCGCCGCGGCTATCGCGGCGAATGGCGCTACGGCCTCCTCAACGACATCCGCCCTCTCGACAAGGTTCGCGTCAGGCGCACCGTCGACCGCTTCGTCGCGCTCGCCGCCGCCCGTGGCGAGGAGGCGCCGGTGACGGTGCCGCCGGTGCTCGCCTTCGATCCCGGGCATGGCCGCGACGTCGCGGCGCGCTTCGATCTCGCGCTCGACCGCACCATCGTCGCGCTCTGTCCCGGGGCCGAGTATGGCCCGGCCAAGCAGTGGCCGGCCACGCACTATGCCGCGCTCGCGCGCCTTCTCGCCGCCCGCGGCTTCCGTACGTGGATCTTCGGCTCGCGGAAGGATGCCGCCATCGGCGACGAGATCACCCGTCTCGCCGGCCCGGACGCCGCCCCGGTCAACCTCGCCGGCCGCACCGAGCTCCTTGAGGCCATCGACCTGATGAGCCTCGCGGCGAGCGTCGTCACCAACGATTCCGGCCTCATGCACGTCGCCGCGGCGATCGGCCGGCCGCTCGTCGCGCTCTACGGCTCGACAACGCCGGAGATGACGCCGCCGCTCGGCCCGGTCGTCGAGATCGTCGAGCGCCAGCTTCCCTGCCGGCCGTGCTTCGAGCGCACCTGCCCGCTCGGCCATCTCGACTGCCTCAACCTCATCCGCGCCGAGGATGTCGCCGGCTTCGCGCTCCGTCAGGCCGGGGGCGGCGGCGCCTGA
PROTEIN sequence
Length: 257
IVLPGSLKAAIPPWAAGIRERRGYRGEWRYGLLNDIRPLDKVRVRRTVDRFVALAAARGEEAPVTVPPVLAFDPGHGRDVAARFDLALDRTIVALCPGAEYGPAKQWPATHYAALARLLAARGFRTWIFGSRKDAAIGDEITRLAGPDAAPVNLAGRTELLEAIDLMSLAASVVTNDSGLMHVAAAIGRPLVALYGSTTPEMTPPLGPVVEIVERQLPCRPCFERTCPLGHLDCLNLIRAEDVAGFALRQAGGGGA*