ggKbase home page

SCNpilot_BF_INOC_scaffold_33435_1

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(3..1223)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CVW0_HALOH similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 411.0
  • Bit_score: 465
  • Evalue 4.30e-128
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 411.0
  • Bit_score: 465
  • Evalue 1.20e-128
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACL69429.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 411.0
  • Bit_score: 465
  • Evalue 6.10e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothermothrix orenii → Halothermothrix → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1221
TCCGATGATGCTATAAATAAGCTCATTGATTATGAATGGCCGGGAAATGTAAGGGAGCTGGAAAATATAATAGGGCGCTCAATAATAAATATGAATATTGAAATGAACACAATGGATTATCAGGGAATGCTGGAGGCTGTGCTGCTGGCAACGCAGGATGCAATAAGCGTTGTAAACGAAAAGGGCGAGCATATCCTTGTAAATCCGGCATACACGAAGATAACAGGCCTCGAATATGAGGAAGTAATAGGCAAAAATGCTCTCTATGACATTGAAGAGGGTGAAAGCCTTCATCTTAAGGTTCTTTCAACAAAAAAACCGGTTGAAAATACAAAGCTCAAAATACGCCCCAGCGGTAAGACGGTTGTGGCTCAGGCTGCACCAATTATTGTGAATGGCATTTTTAAGGGAAGTGTTGCAGTTCTTCACGATATGTCAGGAATAAAGGACCTGACCGACAAGCTGAATAAGGCGGAAAAAAAGTTAAGAGAGCTGACTTATAAATACAAGCCTGAGGACATAATAGGCAAGTCCGAAGTGATAGCAGAAGTGCGTAAAATGATTGAAAAGGCAGCGAAGGTCCCAGCAACAGTGCTTTTAAAGGGCGAAAGCGGAACGGGAAAAGAGCTGTTTGCCAATTCAATCCATGCTCAAAGCAGGAGGAGTGAAAATAATTTCATAAGAGTAAACTGCGCGGCTCTTTCGGATTCACTGCTGGAGAGCGAGCTTTTCGGATATGAAGAAGGATCATTTACGGGAGCGCTGAAGGGCGGCAGGAAGGGATTGTTTGAAGAAGCTGACAAGGGAACAATATTCCTTGACGAAATATCTGAAATAAGCATGAATACTCAGGCAAAGCTTCTCAGGGTTCTGCAGGAAAAGGAAATAATGAGAGTCGGAAGCAATTATTCTATTCCTATAGATGTGAGAATTATAACCGCAACCAACATTGATTTAACAAAAGCAGTGAGGGAAGGCAGGTTCAGGGAGGATTTGTTCTACAGACTGAACATACTTCCCATAATGATTCCTCCATTGAGAGAAAGAAAGGAAGACATACCCCTGCTCATAAAAAACTTCATAGCTAAATTCAATGATGAGTATGGAAGGCATATATTGAATATATCCGATGATGCTATAAATAAGCTCATTGATTATGAATGGCCGGGAAATGTAAGGGAGCTGGAAAATATAATAGGGCGCTCAATAATAAATATGAAT
PROTEIN sequence
Length: 407
SDDAINKLIDYEWPGNVRELENIIGRSIINMNIEMNTMDYQGMLEAVLLATQDAISVVNEKGEHILVNPAYTKITGLEYEEVIGKNALYDIEEGESLHLKVLSTKKPVENTKLKIRPSGKTVVAQAAPIIVNGIFKGSVAVLHDMSGIKDLTDKLNKAEKKLRELTYKYKPEDIIGKSEVIAEVRKMIEKAAKVPATVLLKGESGTGKELFANSIHAQSRRSENNFIRVNCAALSDSLLESELFGYEEGSFTGALKGGRKGLFEEADKGTIFLDEISEISMNTQAKLLRVLQEKEIMRVGSNYSIPIDVRIITATNIDLTKAVREGRFREDLFYRLNILPIMIPPLRERKEDIPLLIKNFIAKFNDEYGRHILNISDDAINKLIDYEWPGNVRELENIIGRSIINMN