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This organism can only be binned in the context of its binning project RIFCSPLOWO2_01_FULL. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

SCNpilot_BF_INOC_scaffold_34370_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(1142..1711)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYH9_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 1.30e-29
TonB-dependent receptor plug Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 190.0
  • Bit_score: 235
  • Evalue 6.20e-59
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 3.60e-30

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
AAATCACTTCTGACGGATAAAGACGGCGTATTTGAAATCAACGATATCCGTTTTGGTTATTATAATATACGCTTCTCGGCCGTGGGCATGGGCACCGTTCGCATCGATAGCATTCATATCCGTGAAGACCGTTTCGATTTCAACCTGGGCGATGTACGGATGTATCCAGCCGTTGGCGAAATGAATGAAGTGATCGTTTATGCCGAAAAACCATTGATTGAAGCAAAAGACGGCGCCATTATTTATAATGTAGGCGAGTCGGCGCTGAGTGCGGGATCAAGCACCTCGGAATTATTGAAAAATATGCCGCTGGTGTCAACCGATGCCAACGGCCGCATTTTATTAAAAGGAAAAGAACCCAAAATCCTGATCGATGACAAACCAACGGATCTAACTGCCGAACAACTGAGTGATCTGCTGGAATCGATGCCCGGAGGTCTGATTGAAAAAATTGAACTGCTTAGTAATCCGCCGCCGCAATATGCCAGTGAAAGCGGAGGAGTAATTAATATCGCTGGCTTACGGCACCAGGGGCGAAGCGACACTCTCGGGCAACATTTCGTATCGTGA
PROTEIN sequence
Length: 190
KSLLTDKDGVFEINDIRFGYYNIRFSAVGMGTVRIDSIHIREDRFDFNLGDVRMYPAVGEMNEVIVYAEKPLIEAKDGAIIYNVGESALSAGSSTSELLKNMPLVSTDANGRILLKGKEPKILIDDKPTDLTAEQLSDLLESMPGGLIEKIELLSNPPPQYASESGGVINIAGLRHQGRSDTLGQHFVS*