ggKbase home page

SCNpilot_BF_INOC_scaffold_3509_4

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 2018..3187

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Afipia birgiae RepID=UPI0002F1A3C1 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 389.0
  • Bit_score: 658
  • Evalue 5.70e-186
Integrase {ECO:0000313|EMBL:ETR79462.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 389.0
  • Bit_score: 707
  • Evalue 8.80e-201
integrase/recombinase protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 390.0
  • Bit_score: 651
  • Evalue 2.00e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGACGACATCGTCAAGAACCGATCCCTCGACGCCGAATCCCGGCGTGCCCTGGACCTCGATACGCTTTCGGCGATCCTGCCCATGGACCGACGGGACCGGCTGGCGCAGCTCTTGACCGACGACGACGTTGCAACGCTCAAGCACCTCGCGCGCGAGGGCATGGGCGAGAACAGCCTGCGGGCGCTGGCGTCGGACCTAGCGTACCTCGAAGGCTGGGCGGCGGCTGCCTCCGGCGCGCCGCTGCCGTGGCCGGCGGGGGAAGCCTTGGCGCTGAAGTTCGTCGCGCATCACTTGTGGGACCCGGCGCAGCGCGAGACCGATCCCCGGCACGGGATGCCGGCAGCGGTCGCCGAGACGCTGCGTGGGGAGGGGCTGTTACGCAGCGCCGGCCCGCATGCGCCGAGCACTGTCAAGCGGCGCCTGGCGAGCTGGGGCACGCTGCACCGGTGGAGGGGAATCGAAGGACCGTTCGGCTCTCCGGCTTTGCGCTCGGCTGTGCGCCTCGCGGTGCGGGCCTCCCCGCGACCGCGCCGGCGGAAGAGCAAGCGCGCCGTGACGCGGGACGTCCTCGACCGGCTGACGGCGACGTGTGCGACGGACCGGCTCGCCGACACGCGCGATCTCGCCATCCTGCTGCTGGCCTTCGCCTCCGGCGGGCGGCGGCGCAGCGAGGTGGCGCGGCTGCGGATCGAGCAGTTGAGCGACGAGCCAGCCGTGCCGCTCGATCCGATGGACCCGAACTCGCCGACGCTACCATGCGTCGCGATCCAGCTGGGCCGCACCAAGACTGGCGATGCGGACGAGGAGGCAAGGGTGTTCCTTGTCGGCCCGCCGGTCGAGGCTCTTCGGGAGTGGCTCGAGCGGAGCAACATCCAAAAGGGGCCAGTGTTCCGCGCGATCGACCGCTGGGAGGTATTGGAGGAGCGGGCGCTGACGCCGCAGTCGATCAACCTGATCGTCAAGCGGCGGTGCGCGATGGCCGGACTCGATCCAAGAGAGTTTGCCGCGCACGGCCTCCGGTCGGGGTATCTCACCGAGGCGGCGCGGCAGGGCGTGGCGCTGCCCGAGGCGATGCAGCAGTCGCAGCACCGATCGGTCCAGCAGGCGGCGAGCTACTACAACGAGGCGGAGCGCGCGCAGGGGAGGGCTGCGCGAATGGCGTTGTGA
PROTEIN sequence
Length: 390
MDDIVKNRSLDAESRRALDLDTLSAILPMDRRDRLAQLLTDDDVATLKHLAREGMGENSLRALASDLAYLEGWAAAASGAPLPWPAGEALALKFVAHHLWDPAQRETDPRHGMPAAVAETLRGEGLLRSAGPHAPSTVKRRLASWGTLHRWRGIEGPFGSPALRSAVRLAVRASPRPRRRKSKRAVTRDVLDRLTATCATDRLADTRDLAILLLAFASGGRRRSEVARLRIEQLSDEPAVPLDPMDPNSPTLPCVAIQLGRTKTGDADEEARVFLVGPPVEALREWLERSNIQKGPVFRAIDRWEVLEERALTPQSINLIVKRRCAMAGLDPREFAAHGLRSGYLTEAARQGVALPEAMQQSQHRSVQQAASYYNEAERAQGRAARMAL*