ggKbase home page

SCNpilot_BF_INOC_scaffold_4791_8

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(3116..3445)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain-containing protein (Fragment) n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KH27_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 106.0
  • Bit_score: 114
  • Evalue 5.10e-23
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:EOS45603.1}; Flags: Fragment;; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 106.0
  • Bit_score: 114
  • Evalue 7.10e-23
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 82.0
  • Bit_score: 78
  • Evalue 1.50e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium COE1 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
ATGGGCGGCGGAAGCAGCGGACGATTTAAGGGAACCAGGGGTGCGGGAAGTAAGAATTATAAAATAGAAAGCACCTATAAATTGAGGCCAACACATGGAAGAACTCTGAGAAATAAAGAGTTTAATACTCTGAAAGCAGATATAAAAGAAAATGGTATCAAAGATACTATCAAATATGTTGAACACAATGGAACAAAATATGTGGTTGATGGTCATCATAGGCTTCTAGTTGCAAAACAAATTGGAATTAAGGAAATTCCTATAGAAAAAGTATCGTTGCCATTCAAAGGCTATAAAACACCTGACGATTTATTTTGGTGGGGCGATTAA
PROTEIN sequence
Length: 110
MGGGSSGRFKGTRGAGSKNYKIESTYKLRPTHGRTLRNKEFNTLKADIKENGIKDTIKYVEHNGTKYVVDGHHRLLVAKQIGIKEIPIEKVSLPFKGYKTPDDLFWWGD*