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SCNpilot_BF_INOC_scaffold_57873_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(249..794)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D063_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 108.0
  • Bit_score: 68
  • Evalue 9.00e-09
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 108.0
  • Bit_score: 68
  • Evalue 2.50e-09
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA25719.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 108.0
  • Bit_score: 68
  • Evalue 1.30e-08

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGTCCCGGCGATGCTCCAGTCGAAGAGGCGGATCCCGACCTGGCGCTCGTCGCCCAGGCTCAGGAACACCCGGCCGCCTTCGAGGCGATCGTTCTCCGCTACCGCCTGCCCCTCCTCCGCTATTTCCACGCCCGGCTCGGCGATTGGGCCGACGCCGAGGACGCCGCCCAGGAGGTGTTGCCACGCCTCCTTCCGCGCCTGGCTCTTCGCGATCGCCCACAACGCCAAGGTCGATGTTCAGCGGCGGCGGGCGATCCGGCGGCAGGAGACGCTGCCGGAGACGCCCGGCTGGGCCGATCCCGCCCCGTCGCCCGAGGATGAGGCGCTGCGGGAGGACACCAGCGCTGAATTGCGCCGCCTGCTGGCGAGCCTGACCGACGACCAGCGCGCCGTGGTTCAGCTGCGCGCCGCCGACCTCGCCACCGACGAGATCGCCAGCGCGCTCGGTTTGACCCAGAGCGCCGTTCGCAAGGCGCAGCAACGCGCCTTCGAACGCCTTCGCGCCCTGGCAAAGACGCAGATCGAATCGAGCGCGACGCCATGA
PROTEIN sequence
Length: 182
MVPAMLQSKRRIPTWRSSPRLRNTRPPSRRSFSATACPSSAISTPGSAIGPTPRTPPRRCCHASFRAWLFAIAHNAKVDVQRRRAIRRQETLPETPGWADPAPSPEDEALREDTSAELRRLLASLTDDQRAVVQLRAADLATDEIASALGLTQSAVRKAQQRAFERLRALAKTQIESSATP*