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SCNpilot_BF_INOC_scaffold_9867_2

Organism: SCNpilot_BF_INOC_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1736..2251

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AY81_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 176.0
  • Bit_score: 280
  • Evalue 8.40e-73
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 6.80e-73
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF90498.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 3.40e-72

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCGTCCTCCACCCATCCCCTGCACCGCGACATCACCGCCCTCTACACCACCCACCACGGCTGGCTGCAGGGCTGGCTGCGCCGCCGGCTGAACCATGCCGGCGATGCGGCCGATCTGGCGCAGGACACCTTCGTGCGCCTGCTCACCGCCCCGGCCGCGCCGGCCGAAGCCCCGCTGCGCGAGCCGCGCGCCTACCTGGCCACGGTGGCGCGGCGGCTGCTGCTCAACCACCTGCGCCGCCAGTCGCTGGAGCAGGCCTACCTGCAGGCGCTGGCCGCGCTGCCCGCGCCCCAGGCGCCGTCGCCCGAGCAGCAGCTGGCGATCCTGCAGGCGCTGCAGGAAATCGACGCCATGCTCGACGGCCTGCCGCCCAAGGTGCGCGCGGTCTTCATCCTGTCCCAGGTCGAGGGGCTGGCCTATGCGGCCATCGCCGAGGAGCTGGGCATGGGCCTGCGCTCGGTCAAGCGCTACATGGCCCAGGCCATGGCCAAATGCATTCTGCTGGCGCCATGA
PROTEIN sequence
Length: 172
MPSSTHPLHRDITALYTTHHGWLQGWLRRRLNHAGDAADLAQDTFVRLLTAPAAPAEAPLREPRAYLATVARRLLLNHLRRQSLEQAYLQALAALPAPQAPSPEQQLAILQALQEIDAMLDGLPPKVRAVFILSQVEGLAYAAIAEELGMGLRSVKRYMAQAMAKCILLAP*