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SCNpilot_BF_INOC_scaffold_1

Search features with annotation key words

Displaying items 481-510 of 800 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1_481
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

564103..564828
DNA (726bp) protein (242aa)
hypothetical protein id=7716951 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1_482

Not on your lists

564828..565520
DNA (693bp) protein (231aa)
hypothetical protein id=7716952 bin=BACIGN_2 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein family UPF0066 domain protein {ECO:0000313|EMBL:AEI30745.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1_483
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

565607..569263
DNA (3657bp) protein (1219aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] id=7716953 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Methionine synthase {ECO:0000313|EMBL:AEN74325.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AEN74325.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
methionine synthase (EC:2.1.1.13)
SCNpilot_BF_INOC_scaffold_1_484
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(569279..571687)
DNA (2409bp) protein (803aa)
TonB-dependent receptor plug id=7716954 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
TonB-dependent receptor plug
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_1_485
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

571878..572333
DNA (456bp) protein (152aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] id=7716955 bin=BACIGN_2 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
SCNpilot_BF_INOC_scaffold_1_486
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

572583..577298
DNA (4716bp) protein (1572aa)
hypothetical protein id=7716956 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1_487
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

577378..578355
DNA (978bp) protein (326aa)
KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] id=7716957 bin=BACIGN_2 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
arabinose 5-phosphate isomerase
Tax=BJP_IG2069_Anaerolineales_43_63
SCNpilot_BF_INOC_scaffold_1_488
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(578352..579227)
DNA (876bp) protein (292aa)
putative Xre family transcriptional regulator id=7716958 bin=BACIGN_2 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
putative Xre family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1_489
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

579340..579930
DNA (591bp) protein (197aa)
id=7716959 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7716959 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_1_490
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

579927..581285
DNA (1359bp) protein (453aa)
hypothetical protein id=7716960 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1_491
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

581275..582324
DNA (1050bp) protein (350aa)
hypothetical protein id=7716961 bin=BACIGN_2 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_1_492
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

582345..583085
DNA (741bp) protein (247aa)
Glycosyltransferase, probably involved in cell wall biogenesis id=7716962 bin=BACIGN_2 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=BACIGN_2 organism_group=Unknown_CP
putative glycosyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
putative glycosyltransferase
SCNpilot_BF_INOC_scaffold_1_493
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

583063..584091
DNA (1029bp) protein (343aa)
purM; Phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=7716963 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
purM; Phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=GWF2_RIF_IGX_33_9_curated
purM; phosphoribosylaminoimidazole synthetase
SCNpilot_BF_INOC_scaffold_1_494
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

584094..585125
DNA (1032bp) protein (344aa)
id=7716964 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7716964 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_1_495
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

585136..587772
DNA (2637bp) protein (879aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=7716965 bin=BACIGN_2 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP
RecQ familyATP-dependent DNA helicase
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_1_496
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

587756..592033
DNA (4278bp) protein (1426aa)
peptidase S8/S53 subtilisin kexin sedolisin id=7716966 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
peptidase S8/S53 subtilisin kexin sedolisin
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_1_497
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(592023..593438)
DNA (1416bp) protein (472aa)
UDP-N-acetylmuramate; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=7716967 bin=BACIGN_2 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
UDP-N-acetylmuramate
UDP-N-acetylmuramate {ECO:0000313|EMBL:ACF11967.1}; Flags: Precursor;; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (
SCNpilot_BF_INOC_scaffold_1_498
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

593554..594897
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=7716968 bin=BACIGN_2 species=Halomonas sp. HAL1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
SCNpilot_BF_INOC_scaffold_1_499
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(594901..595338)
DNA (438bp) protein (146aa)
id=7716969 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_BF_INOC_scaffold_1_500
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(595323..596174)
DNA (852bp) protein (284aa)
Alpha/beta superfamily hydrolase id=7716970 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EHO40503.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
alpha/beta superfamily hydrolase
SCNpilot_BF_INOC_scaffold_1_501
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(596171..596878)
DNA (708bp) protein (236aa)
tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=7716971 bin=BACIGN_2 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
tRNA (guanine-N1)-methyltransferase
SCNpilot_BF_INOC_scaffold_1_502
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(596871..597425)
DNA (555bp) protein (185aa)
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=7716972 bin=BACIGN_2 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" sour
rimM; 16S rRNA processing protein RimM
SCNpilot_BF_INOC_scaffold_1_503
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(597425..598288)
DNA (864bp) protein (288aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=7716973 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
RNA polymerase, sigma 70 subunit, rpod subfamily Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA polymerase, sigma 70 subunit, rpod subfamily
SCNpilot_BF_INOC_scaffold_1_504
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(598389..600038)
DNA (1650bp) protein (550aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=7716974 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
carboxyl-terminal protease
SCNpilot_BF_INOC_scaffold_1_505
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


comp(600066..601496)
DNA (1431bp) protein (477aa)
glyS1; Glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=7716975 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
glyS1; Glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=GWF2_RIF_IGX_33_9_curated
glyS1; glycyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_1_506
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

601896..603884
DNA (1989bp) protein (663aa)
protein-disulfide reductase (EC:1.8.1.8) id=7716976 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
protein-disulfide reductase (EC:1.8.1.8) Tax=GWF2_RIF_IGX_33_9_curated
Thiol:disulfide interchange protein
SCNpilot_BF_INOC_scaffold_1_507
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(603913..604368)
DNA (456bp) protein (152aa)
N-acetyltransferase GCN5 id=7716977 bin=BACIGN_2 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=BACIGN_2 organism_group=Unknown_CP
GCN5 family acetyltransferase {ECO:0000313|EMBL:KER10775.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlo
N-acetyltransferase GCN5
SCNpilot_BF_INOC_scaffold_1_508
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(604388..605263)
DNA (876bp) protein (292aa)
panC; pantoate--beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] id=7716978 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
panC; pantoate--beta-alanine ligase
SCNpilot_BF_INOC_scaffold_1_509
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

605342..606142
DNA (801bp) protein (267aa)
id=7716979 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7716979 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_1_510
unknown

Not on your lists

606358..606510
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 481-510 of 800 in total

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