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SCNpilot_BF_INOC_scaffold_15

Search features with annotation key words

Displaying items 271-300 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_15_271
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(337539..338996)
DNA (1458bp) protein (486aa)
gatB; Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=7717307 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
glutamyl-tRNA(Gln) amidotransferase, B subunit Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
glutamyl-tRNA(Gln) amidotransferase, B subunit
SCNpilot_BF_INOC_scaffold_15_272
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(339090..340502)
DNA (1413bp) protein (471aa)
hypothetical protein id=7717306 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
tetratricopeptide domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
tetratricopeptide domain-containing protein
SCNpilot_BF_INOC_scaffold_15_273
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(340520..341461)
DNA (942bp) protein (314aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=7717305 bin=BACIGN_2 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Putative threonine dehydratase, catabolic {ECO:0000313|EMBL:EAZ98110.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source=
srr; serine racemase
SCNpilot_BF_INOC_scaffold_15_274
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(341458..342219)
DNA (762bp) protein (254aa)
peptidoglycan binding domain-containing protein id=7717304 bin=BACIGN_2 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
peptidoglycan-binding domain 1 protein Tax=GWC2_Nitrospirae_56_14_curated
protein with peptidoglycan-binding domain
SCNpilot_BF_INOC_scaffold_15_275
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(342377..344359)
DNA (1983bp) protein (661aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] id=7717303 bin=BACIGN_2 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Methylmalonyl-CoA mutase, N-terminal domain/subunit {ECO:0000313|EMBL:AFD08918.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;
methylmalonyl-CoA mutase, N-terminal domain/subunit
SCNpilot_BF_INOC_scaffold_15_276
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(344401..345744)
DNA (1344bp) protein (448aa)
Uncharacterized protein id=7717302 bin=BACIGN_2 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2158_Zixibacteria_48_33
SCNpilot_BF_INOC_scaffold_15_277
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(345816..348014)
DNA (2199bp) protein (733aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=7717301 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
copper-transporting P-type ATPase Tax=GWA2_Ignavibacteria_54_16_curated
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_15_278
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(348014..348241)
DNA (228bp) protein (76aa)
heavy metal-binding protein; K07213 copper chaperone id=7717300 bin=BACIGN_2 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=BACIGN_2 organism_group=Unknown_CP
heavy metal-binding protein
Heavy metal-binding protein {ECO:0000313|EMBL:BAH39946.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strai
SCNpilot_BF_INOC_scaffold_15_279
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(348243..349643)
DNA (1401bp) protein (467aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] id=7717299 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EQA52667.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EQA52667.1};; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="
methylmalonyl-CoA mutase
SCNpilot_BF_INOC_scaffold_15_280
unknown

Not on your lists

349753..349893
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_15_281
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

350562..352148
DNA (1587bp) protein (529aa)
Putative RNA-processing exonuclease id=7717298 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
beta-lactamase domain protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA-processing exonuclease
SCNpilot_BF_INOC_scaffold_15_282
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

352145..352291
DNA (147bp) protein (49aa)
id=7717297 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717297 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_283
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(352225..352896)
DNA (672bp) protein (224aa)
id=7717296 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717296 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_284
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(353014..356232)
DNA (3219bp) protein (1073aa)
id=7717295 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717295 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_285
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356344..357018)
DNA (675bp) protein (225aa)
serine/threonine protein phosphatase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] id=7717294 bin=BACIGN_2 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KIE41517.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
metallophosphoesterase
SCNpilot_BF_INOC_scaffold_15_286
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357015..357824)
DNA (810bp) protein (270aa)
putative glutamine cyclotransferase id=7717293 bin=BACIGN_2 species=Brevundimonas diminuta genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Glutamine cyclotransferase {ECO:0000313|EMBL:EKY28001.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimona
putative glutamine cyclotransferase
SCNpilot_BF_INOC_scaffold_15_287
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

357839..359038
DNA (1200bp) protein (400aa)
ErfK/YbiS/YcfS/YnhG family protein id=7717292 bin=BACIGN_2 species=Gillisia marina genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
ErfK/YbiS/YcfS/YnhG family protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_15_288
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(359157..359852)
DNA (696bp) protein (232aa)
id=7717291 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717291 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_289
Human herpesvirus 4, Lymphocryptovirus, Herpesvirales, Viruses

Not on your lists

comp(360059..360484)
DNA (426bp) protein (142aa)
id=7717290 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Latent membrane protein 1 {ECO:0000313|EMBL:AFD33378.1}; TaxID=10376 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.;" source="Epste
hypothetical protein
SCNpilot_BF_INOC_scaffold_15_290
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(360542..361873)
DNA (1332bp) protein (444aa)
id=7717289 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717289 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_291
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(361900..362451)
DNA (552bp) protein (184aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7717288 bin=BACIGN_2 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_15_292
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(362516..363853)
DNA (1338bp) protein (446aa)
recombination factor protein RarA; K07478 putative ATPase id=7717287 bin=BACIGN_2 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
recombination factor protein RarA
AAA ATPase central domain protein {ECO:0000313|EMBL:ACF44111.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="
SCNpilot_BF_INOC_scaffold_15_293
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

363868..364980
DNA (1113bp) protein (371aa)
id=7717286 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717286 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_15_294
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(364986..365939)
DNA (954bp) protein (318aa)
Putative Zn-dependent hydrolase id=7717285 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AFN73925.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source
SCNpilot_BF_INOC_scaffold_15_295
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

366138..366953
DNA (816bp) protein (272aa)
id=7717284 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=4322737 Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_BF_INOC_scaffold_15_296
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

366983..367399
DNA (417bp) protein (139aa)
hypothetical protein id=7717283 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55105.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_15_297
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

367415..367981
DNA (567bp) protein (189aa)
Hypothetical conserved protein id=7717282 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_15_298
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

367997..368740
DNA (744bp) protein (248aa)
hypothetical protein id=7717281 bin=BACIGN_2 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=BACIGN_2 organism_group=Unknown_CP
Ankyrin repeat-containing protein
Ankyrin {ECO:0000313|EMBL:KKH02669.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcin
SCNpilot_BF_INOC_scaffold_15_299
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

368824..369795
DNA (972bp) protein (324aa)
transcriptional regulator id=7717280 bin=BACIGN_2 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
putative transcriptional regulator Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_15_300
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

369865..370386
DNA (522bp) protein (174aa)
id=7717279 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=3803232 Tax=GWF2_RIF_IGX_33_9_curated
Displaying items 271-300 of 309 in total

View Taxonomy