ggKbase home page

SCNpilot_BF_INOC_scaffold_39

Search features with annotation key words

Displaying items 181-204 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_39_181
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

204486..205133
DNA (648bp) protein (216aa)
isomerase id=7718145 bin=BACIGN_2 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
isomerase
SCNpilot_BF_INOC_scaffold_39_182
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

205130..206518
DNA (1389bp) protein (463aa)
id=7718144 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_BF_INOC_scaffold_39_183
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

206515..207090
DNA (576bp) protein (192aa)
id=7718143 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718143 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_184
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

207105..208487
DNA (1383bp) protein (461aa)
Kynurenine 3-monooxygenase (EC:1.14.13.9); K00486 kynurenine 3-monooxygenase [EC:1.14.13.9] id=7718142 bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=1237149 species="Bacter
Kynurenine 3-monooxygenase (EC:1.14.13.9)
SCNpilot_BF_INOC_scaffold_39_185
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(208495..211014)
DNA (2520bp) protein (840aa)
hypothetical protein id=7718141 bin=BACIGN_2 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:GAL84338.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_39_186
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

211260..212192
DNA (933bp) protein (311aa)
ldcA; Muramoyltetrapeptide carboxypeptidase; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] id=7718140 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
ldcA; Muramoyltetrapeptide carboxypeptidase; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RBG_16_Ignavibacteria_35_7_curated
ldcA; Muramoyltetrapeptide carboxypeptidase
SCNpilot_BF_INOC_scaffold_39_187
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(212247..213155)
DNA (909bp) protein (303aa)
gspK_1; glucosamine kinase GspK (EC:2.7.1.8)
Glucosamine kinase GspK {ECO:0000313|EMBL:AIG27913.1}; EC=2.7.1.8 {ECO:0000313|EMBL:AIG27913.1};; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" s
hypothetical protein id=7718139 bin=BACIGN_2 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_188
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(213152..213937)
DNA (786bp) protein (262aa)
hypothetical protein id=7718138 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_39_189
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(213970..215601)
DNA (1632bp) protein (544aa)
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=7718137 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
periplasmic protease
SCNpilot_BF_INOC_scaffold_39_190
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(215649..218672)
DNA (3024bp) protein (1008aa)
hypothetical protein id=7718136 bin=BACIGN_2 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_39_191
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(218721..219659)
DNA (939bp) protein (313aa)
Acid phosphatase {ECO:0000313|EMBL:EEF57801.1}; EC=3.1.3.2 {ECO:0000313|EMBL:EEF57801.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdiv
putative phosphatase id=7718135 bin=BACIGN_2 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=BACIGN_2 organism_group=Unknown_CP
putative phosphatase
SCNpilot_BF_INOC_scaffold_39_192
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

219795..220214
DNA (420bp) protein (140aa)
tRNA/rRNA methyltransferase SpoU id=7718134 bin=BACIGN_2 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
tRNA/rRNA methyltransferase SpoU Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
tRNA/rRNA methyltransferase SpoU
SCNpilot_BF_INOC_scaffold_39_193
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

220211..220972
DNA (762bp) protein (254aa)
id=7718133 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_BF_INOC_scaffold_39_194
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

221081..221740
DNA (660bp) protein (220aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] id=7718132 bin=BACIGN_2 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
transaldolase
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_39_195

Not on your lists

221762..222418
DNA (657bp) protein (219aa)
TetR family transcriptional regulator id=7718131 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
Marine sediment metagenome DNA, contig: S01H4_S13383 {ECO:0000313|EMBL:GAG90814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
TetR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_39_196
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(222440..223249)
DNA (810bp) protein (270aa)
hypothetical protein id=7718130 bin=BACIGN_2 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW31277.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
SCNpilot_BF_INOC_scaffold_39_197
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

223329..224318
DNA (990bp) protein (330aa)
hypothetical protein id=7718129 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:CCH55184.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
cold-shock protein
SCNpilot_BF_INOC_scaffold_39_198
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224335..225501
DNA (1167bp) protein (389aa)
aminotransferase (EC:2.6.1.-); K14287 methionine aminotransferase [EC:2.6.1.-] id=7718128 bin=BACIGN_2 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AGP41986.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulos
SCNpilot_BF_INOC_scaffold_39_199
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(225529..226779)
DNA (1251bp) protein (417aa)
processing peptidase (EC:3.4.24.64) Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
processing peptidase id=7718127 bin=BACIGN_2 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
peptidase M16 domain protein
SCNpilot_BF_INOC_scaffold_39_200
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(227249..227971)
DNA (723bp) protein (241aa)
id=7718126 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718126 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_201
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(228627..229337)
DNA (711bp) protein (237aa)
id=7718125 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718125 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_202
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(229539..230258)
DNA (720bp) protein (240aa)
id=7718124 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718124 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_203
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(230262..231743)
DNA (1482bp) protein (494aa)
id=7718123 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718123 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_39_204
unknown

Not on your lists

comp(232478..233038)
DNA (561bp) protein (187aa)

This feature has no annotations

Displaying items 181-204 of 204 in total

View Taxonomy